G58588


Basic Information

Item Value
gene id G58588
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 2476272 ~ 2479608 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU78755
ACCCCACCTCTGCAGTGCAGGGGTGGTTCCTCCTGCAGGCAGAGGAGGGTCGTTAGTAGATTGGAGCCACCTGGGCTCAGGTATTTAAGTTGCCTCTAATcactttgttctctctctctgctcctccaggtATGACTTGGTTTAGTTTGTTCCTTTATAGTTCTACTTAGTTTTCATTCAGTCATTTACACCTATACAGATTCATTCATCCATGCACTTTGCATACACCTTACATTATGACATTCTCACAcctcattcctttttctttatttaaagttactagttttgatttataataaaatatagttTGATTGGCCTATACCTGTTGTTGGTGTCCCCTCATTTATTTGCCACAGGCCATGAGCCGGTTTGTGACAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78755 True 379 lncRNA 0.41 2 2476272 2479608

Neighbor

gene id symbol gene type direction distance location
lrrtm4l2 LOC104959582,LOC103353626 coding downstream 120002 2353073 ~ 2356270 (-)
vsig8b NA coding downstream 145449 2324986 ~ 2330823 (-)
LOC120560449 NA coding downstream 156996 2318287 ~ 2319276 (-)
cabin1 cabin1 coding downstream 213458 2217592 ~ 2262814 (-)
tbx16 LOC104928806,LOC103353632 coding downstream 259561 2207405 ~ 2216711 (-)
LOC120560021 NA coding upstream 24864 2504472 ~ 2508814 (-)
LOC120560452 LOC104959125 coding upstream 57610 2537218 ~ 2537559 (-)
LOC120560454 NA coding upstream 71820 2551428 ~ 2552694 (-)
ggt5a ggt5 coding upstream 139607 2619215 ~ 2627761 (-)
si:ch211-170d8.2 NA coding upstream 187654 2667262 ~ 2671095 (-)
G58560 NA non-coding downstream 141250 2334746 ~ 2335022 (-)
G58559 NA non-coding downstream 142083 2333979 ~ 2334189 (-)
LOC120561446 NA non-coding downstream 293544 2179896 ~ 2182728 (-)
G58529 NA non-coding downstream 302952 2172439 ~ 2173320 (-)
G58521 NA non-coding downstream 329720 2146122 ~ 2146552 (-)
LOC120561196 NA non-coding upstream 11659 2491267 ~ 2491794 (-)
G58596 NA non-coding upstream 38347 2517955 ~ 2518201 (-)
G58625 NA non-coding upstream 77037 2556645 ~ 2556863 (-)
G58678 NA non-coding upstream 236293 2715901 ~ 2716316 (-)
G58716 NA non-coding upstream 322134 2801742 ~ 2801971 (-)
ankrd39 LOC103353637,LOC100700369 other downstream 336629 2137796 ~ 2139643 (-)
rimbp2 rimbp2,LOC107081823,LOC108247306,LOC103353655 other downstream 818224 1532053 ~ 1658048 (-)
LOC120560045 NA other downstream 2451323 17589 ~ 24949 (-)
LOC120560995 NA other upstream 70438 2550046 ~ 2551366 (-)
ggt1a ggt1,LOC102775580,LOC108234964 other upstream 98267 2577875 ~ 2592746 (-)
si:ch211-107p11.3 LOC103353652,LOC102075650,LOC108234931,LOC104950460 other upstream 206283 2685891 ~ 2689087 (-)
LOC120561394 LOC107097799,LOC103353613,LOC101077666 other upstream 211002 2690610 ~ 2692543 (-)
LOC120561349 donson,LOC102310661 other upstream 354580 2834188 ~ 2846607 (-)

Expression


Co-expression Network