G58618 (ggt5,LOC104956559)


Basic Information

Item Value
gene id G58618
gene name ggt5,LOC104956559
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 2624117 ~ 2625352 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU78788
TTCTGAGCTGAAGTGTGGATCACGGATGTGTTTCTTTAATCCGTTGGCAAACTTAAAAGCTTCAACAAAGCGATGATAGGTCAGTGTCTTTTGATCACCCATCAGAGATGCTGGATTCAATTTATATCCTGCAAATAAGAGCAATTGTTTAGTTTTCCCCAGTGTATTGCACTTACAAAGATGTGCAGTATCTAGATGCTTCCCGAACATTAACACACTCCACACTACACTACATAGTCACCCCATCATTCTGTCTCCTCATTTGGGTAACTCAAATGCAACAACCACTGCAAGTATTGATTTGTCATTTCTCATGAACACAGCTAACAAGCTTTATTCTGTGACTTGAAAGTGCGGATGAGCAGCAGCTCTGCAGTCTGAGTACAGCAGGAACCTTTCATGACGTTCAGGATGAGGCTGAGGATGATGCCTCCTGCAGGGGGTGGGGGGATGTACATCTGGTACTCTCCCAAAGGAACGGCCCACGCATCAGTCACTGTAGCTCTATACGATGCCAGGTCCTGCGCCGTGAGTGTTCCTCCTGCCTCCTGTATGTCACGGATTAAATCCTCTGCTATTCTTCCCGTGTAAAAAGCGTCTGCCCCGTGGTTTGCTATCATCTCCAACGTGTCGGCCAGTTTCTCAAACTTCACAATATCACCAATCGTCAGCAAGTTCCCATTCTTATTGGTGTACAACTTTCGTAGCGGCTGGGTCTGGTTCGTATCAACGTACGGGATGTATCGACCTTGGACGTAAGGAATAGGAAACCCTTCTCTGGCCAGTTGGATGGTCGGCTGGAAGAGGGTCGCCCACGGCAATTTCCCATAAAGCCTGTATGCCTGTTCATAACCCCGAATTTCCCCCGGAACCCCAATCCATTGGCT

Function

symbol description
ggt5 Enables glutathione hydrolase activity; leukotriene-C(4) hydrolase; and peptidyltransferase activity. Involved in carboxylic acid metabolic process; glutathione catabolic process; and proteolysis. Is intrinsic component of plasma membrane.

NR:

description
PREDICTED: gamma-glutamyltransferase 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78788 True 887 lncRNA 0.47 3 2624117 2625352

Neighbor

gene id symbol gene type direction distance location
lrrc75ba lrrc75b,LOC104956515,LOC102775864 coding upstream 7144 2600890 ~ 2616973 (+)
anapc5 anapc5,LOC102800026 coding upstream 47067 2560749 ~ 2577050 (+)
LOC120560453 NA coding upstream 84984 2537954 ~ 2539133 (+)
LOC120561412 lrrtm4,LOC104959581,LOC103353625,LOC101488074,LOC100703069,LOC102799547 coding upstream 189175 2365750 ~ 2434942 (+)
LOC120560154 nefl,LOC102797482,LOC104959585 coding upstream 357374 2262909 ~ 2266743 (+)
asphd2 asphd2 coding downstream 5152 2630504 ~ 2634683 (+)
cabp1a cabp1,LOC100709699,LOC102206763,LOC102781601,LOC104946293 coding downstream 14800 2640152 ~ 2654597 (+)
mlec mlec coding downstream 31159 2656511 ~ 2662450 (+)
LOC120561358 LOC104949113 coding downstream 259409 2884761 ~ 2889848 (+)
LOC120561351 NA coding downstream 272188 2897540 ~ 2913826 (+)
G58603 NA non-coding upstream 93394 2530492 ~ 2530723 (+)
G58601 NA non-coding upstream 97847 2526052 ~ 2526270 (+)
G58599 NA non-coding upstream 99550 2524207 ~ 2524567 (+)
G58598 NA non-coding upstream 100183 2523641 ~ 2523934 (+)
G58597 NA non-coding upstream 100479 2523439 ~ 2523638 (+)
G58650 NA non-coding downstream 38051 2663403 ~ 2665691 (+)
G58651 NA non-coding downstream 40466 2665818 ~ 2667041 (+)
G58652 NA non-coding downstream 41906 2667258 ~ 2667835 (+)
G58653 NA non-coding downstream 42734 2668086 ~ 2668677 (+)
G58673 NA non-coding downstream 80461 2705813 ~ 2706139 (+)
dock5 dock5 other upstream 311452 2273678 ~ 2312665 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other upstream 1786256 789405 ~ 837861 (+)
LOC120560799 NA other upstream 2411734 210742 ~ 212383 (+)
lman2lb NA other downstream 253022 2878374 ~ 2883861 (+)
LOC120560521 tjp2 other downstream 809813 3435165 ~ 3522756 (+)
G59086 NA other downstream 1491927 4117279 ~ 4117631 (+)
G59172 sub1 other downstream 1798789 4424141 ~ 4429981 (+)
trnal-aag_1 NA other downstream 1806819 4432171 ~ 4432253 (+)

Expression


Co-expression Network