G58651


Basic Information

Item Value
gene id G58651
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 2665818 ~ 2667041 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU78833
ACACTTTTCTGGGCTCGATTTTCATTCCACACGACCAGCTGTTTCCGGAGTAAGGGACGACTGGCCGTAGAATTATTATATCTGTAGTCTGTCGACCTCAAACCTTTCTAGGAGCAAAGCTAGTCAAAAACAAACGTAAAGGTTAGTAAGAGAAGTGTACACGTGTATATGTCCAGCACTTGTTTCAAGCAGTCTACTTAGCTCCTCGCCAGCCTTTTTTCGGAGCGGTTATCGTCGATACATCTCAGAATTGAAGGAACTAGAGTGGAATGAAGATCTGCTctcttgtgtcttttttttttttttttttccacatgagAACCAAAGAATTGCCGCCATTCCATCAAAATTCCAGTGTCCTAATGTGACACTGAAGGTTCTTCATTTCTTTCATCCTtctttttttgcttcttttcCTCACCTGGTAAAACAGTGAACAAACCAGGGGAGGAAAACATCTCATGTCATcagatttaatatttaattattcCCCTGCCACGGCGCCCAATCTTCTTGAAATGTCCCTccttatgaaaataaaataaagtaattttaaatgcattgtaatttaatgtaaaatTTGTTTGAGATAACCTTTCCCAGCTTGTTgctatttctctttctctcccccctcaTTTTTCAAAAGCAACTGAAAATTTGAGATGAATTTAAACTGAGACAAATTTTAAACAGCAAAACTTCTGCCAATGTGTCCTCATCATCCAGGCagcgaaacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacggtctgaCAGCCACCGATCACACAGTGCGAGTGTGTGAGACAGTGAGTGTGCGCTTAAATGTGATTCCTACTGTGTAGACATACATGTGCTGGATGAATAAATGCTCTTCTGGGGGCTGTAGGCAGCAGCAGGTGGACTGGTGAAATGTTCTCTAGACCCCTGATCTTACTCTGATGTGGCATATATCTGCAAAATGGGAAATGCTGATAAATGCTGtctctttttaataaatgtgCTATTTTGTCAGAATGTGGTGCTGCTGTTTTTCCCCATCCCGACACCCCTGATGTTGCCGTCGAGTACTTTTGTGAGGTATCTTGGTACTTGACATTAGTCTAAATTTGAATTGTTTTGTTGCATGTGAATCCGCAGAATTTTAAAGTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78833 True 1224 lncRNA 0.41 1 2665818 2667041

Neighbor

gene id symbol gene type direction distance location
mlec mlec coding upstream 3368 2656511 ~ 2662450 (+)
cabp1a cabp1,LOC100709699,LOC102206763,LOC102781601,LOC104946293 coding upstream 11221 2640152 ~ 2654597 (+)
asphd2 asphd2 coding upstream 31135 2630504 ~ 2634683 (+)
lrrc75ba lrrc75b,LOC104956515,LOC102775864 coding upstream 48845 2600890 ~ 2616973 (+)
anapc5 anapc5,LOC102800026 coding upstream 88768 2560749 ~ 2577050 (+)
LOC120561358 LOC104949113 coding downstream 217720 2884761 ~ 2889848 (+)
LOC120561351 NA coding downstream 230499 2897540 ~ 2913826 (+)
nsmfb nsmf,LOC101467740,LOC102197052,LOC102311847 coding downstream 270988 2938029 ~ 2993038 (+)
rabl6b rabl6 coding downstream 547548 3214589 ~ 3234118 (+)
imp4 imp4 coding downstream 573088 3240129 ~ 3245982 (+)
G58650 NA non-coding upstream 127 2663403 ~ 2665691 (+)
G58618 ggt5,LOC104956559 non-coding upstream 40466 2624117 ~ 2625352 (+)
G58603 NA non-coding upstream 135095 2530492 ~ 2530723 (+)
G58601 NA non-coding upstream 139548 2526052 ~ 2526270 (+)
G58599 NA non-coding upstream 141251 2524207 ~ 2524567 (+)
G58652 NA non-coding downstream 217 2667258 ~ 2667835 (+)
G58653 NA non-coding downstream 1045 2668086 ~ 2668677 (+)
G58673 NA non-coding downstream 38772 2705813 ~ 2706139 (+)
G58679 NA non-coding downstream 49687 2716728 ~ 2716938 (+)
LOC120561019 NA non-coding downstream 66499 2733540 ~ 2735823 (+)
dock5 dock5 other upstream 353153 2273678 ~ 2312665 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other upstream 1827957 789405 ~ 837861 (+)
LOC120560799 NA other upstream 2453435 210742 ~ 212383 (+)
lman2lb NA other downstream 211333 2878374 ~ 2883861 (+)
LOC120560521 tjp2 other downstream 768124 3435165 ~ 3522756 (+)
G59086 NA other downstream 1450238 4117279 ~ 4117631 (+)
G59172 sub1 other downstream 1757100 4424141 ~ 4429981 (+)
trnal-aag_1 NA other downstream 1765130 4432171 ~ 4432253 (+)

Expression


Co-expression Network