si:ch211-107p11.3 (LOC103353652,LOC102075650,LOC108234931,LOC104950460)


Basic Information

Item Value
gene id si:ch211-107p11.3
gene name LOC103353652,LOC102075650,LOC108234931,LOC104950460
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 2685891 ~ 2689087 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU78855
CTGGGTTAACAAAGCTTGCTGATATCCAGCTTCATAACACCGGTTATCTTTCTCCCGTTTCCGTCGCGTACACAGTTATTGCTCCATGTGAAGCGTGCTGTGATTAACCGTCGCGTCTATTAAGCTCGGATTTGTTCCGTTTTGCGACCTTTGGGTTACGATTTGATTACTAAATCTAGCATTGAAACATCTCGGATAACTGCGCGCACCCGCTCCACCATAAAGGGAAGAGCAATCGCACGCCGAAAGCCTGATCCCAATCCATGAACACCGACAGAGatttCCAGATGATGAAAAAACAAGAGAGGGCACATTTTTTCAGCTCTAAAGAGCAGGATCTCATTTTGAAGTTGTacgaagaagagagagaggtattGACAGCCAAATCCAACACTACCAGTGCCTCTAAACTGAGAGAGGAAGCCTGGCAGAGAATTGCTGATAAAATAAACGCGGTATCGGACAGCGGCTACAAAAGATCATGGCAGCAAGTGAAAgtcaaacataaaaatatagtGCAAACAGCGAAAAGAAGACAGGTGGGGGCGACGAGGACTGAGGGGGAGTCAGCAACCCCGTCGCTGACGTCCGCAGAGGAAGATGTGCTGCAGGACAAAGACAGCCTGCTGAGAGTGGAGGTCCTCCCTGGGGGGGCCTGCATTGAGCCACTCACTGGATCTGACAACTCTTTTATTAGTGTCTCAGGCCATCCTGTCCTCCTCCTGCCTGTCACAAAGACTGAACCAGAGAGCCTGAGCAGTGATGAGACAGACGTCAGTGACTCTCATTTTGAAGGGGATGTGCACAGCAGCAGCATCCAGGAGAGGGCCAACTCAGCGTTTGCTGCGACCGGTGGAAGAAGTGCAGAGAGGCAGACGGAAGACATACGAGCCCTTTACTGCTGCTACCTCAAGAAGGAGATCGAGAACCGTGACCAACAGATGGCATACAGAGCACTTAAAATGAGGAAGATGGAGAAAGAAATTTTATTACTTGATAAGCAGCTC
>XM_039802183.1
CCACAGTTTACTCCTAATaagcctttttcacagcagacatgttgacttgtcacagTGTCCTTGTGTTATTCCACATAATCACTCTACACGAAATTTCCCATGTGGCAGAATGGTTAttatcattttaaatttgtattattatctaGTAAGATGATCTAGACGTGTTTCACGTGACTCGCTCTTTGTTACAGACTCCACCTCTTTCATGTGAACGCGCCTTAAGCCTAATAAGAAAATCCTGGGTTAACAAAGCTTGCTGATATCCAGCTTCATAACACCGGTTATCTTTCTCCCGTTTCCGTCGCGTACACAGTTATTGCTCCATGTGAAGCGTGCTGTGATTAACCGTCGCGTCTATTAAGCTCGGATTTGTTCCGTTTTGCGACCTTTGGGTTACGATTTGATTACTAAATCTAGCATTGAAACATCTCGGATAACTGCGCGCACCCGCTCCACCATAAAGGGAAGAGCAATCGCACGCCGAAAGCCTGATCCCAATCCATGAACACCGACAGAGatttCCAGATGATGAAAAAACAAGAGAGGGCACATTTTTTCAGCTCTAAAGAGCAGGATCTCATTTTGAAGTTGTacgaagaagagagagaggtattGACAGCCAAATCCAACACTACCAGTGCCTCTAAACTGAGAGAGGAAGCCTGGCAGAGAATTGCTGATAAAATAAACGCGGTATCGGACAGCGGCTACAAAAGATCATGGCAGCAAGTGAAAgtcaaacataaaaatatagtGCAAACAGCGAAAAGAAGACAGGTGGGGGCGACGAGGACTGAGGGGGAGTCAGCAACCCCGTCGCTGACGTCCGCAGAGGAAGATGTGCTGCAGGACAAAGACAGCCTGCTGAGAGTGGAGGTCCTCCCTGGGGGGGCCTGCATTGAGCCACTCACTGGATCTGACAACTCTTTTATTAGTGTCTCAGGCCATCCTGTCCTCCTCCTGCCTGTCACAAAGACTGAACCAGAGAGCCTGAGCAGTGATGAGACAGACGTCAGTGACTCTCATTTTGAAGGGGATGTGCACAGCAGCAGCATCCAGGAGAGGGCCAACTCAGCGTTTGCTGCGACCGGTGGAAGAAGTGCAGAGAGGCAGACGGAAGACATACGAGCCCTTTACTGCTGCTACCTCAAGAAGGAGATCGAGAACCGTGACCAACAGATGGCATACAGAGCACTTAAAATGAGGAAGATGGAGAAAGAAATTTTATTACTTGATAAGCAGCTCATGTGACCATGTAAAGAAATgctaatgttttttgttttttatcttactattataatatgttaaaacaatatttgatttatttaaggCCAGGCAATTGTAATAAATTGCTTCAGTCACATCATTTGTCATCTTACCTTATATGTAACCAGGTTGGGGAGTTAAGTGCAATGATGGGCAGCAGTGTCACTTGCAATTCTGCCATTAATATGTGTCAGACCATTTCTTTTTTATGGACATTTCCATCTTTAATGATAGGACAgctcagacatgaaaggggagagagagggggaagacatgcaggaaaccatCATGGGTCGGCCTCGAACcatggaccttctgcgtcgaggaattgACCTCAATATacgtgtgcctgctctaccaactgagctaaccggccacgtGTCAGACCATTTCTTATTGTTGCAGTGCACTGTGCAACTCTACACATGCAACAGTACACATCTAGTGCAGTCCGCAGTATCGGAGTAATTTCCTTCAGTTGCCCAAAGATCATTTCAGTCCCTTTATTGTCACGGCAGGAGTTGCCCCAAGTTGGGCTAGTGAGGTTTCAGAGTAGGATGGTCAGGAAGTGGAGCCGCTGTGTAAACCCTGTGGCCCAGGAGGATGCCATTATCACATGATTACAGTGCATTGACACACTGACTGTACTCCTGCACATTGGATCAAACAATGAATGACTTTAAATTGAGGGGCACTTACATCCACGAGTAGTGTAGGAACTGGTAACATAAAAGAAAgtcatatataaatattttgtatttctA

Function

NR:

description
uncharacterized protein LOC110510103 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78855 False 1007 TUCP 0.49 7 2686676 2688849
XM_039802183.1 True 2030 mRNA 0.45 7 2685891 2689087

Neighbor

gene id symbol gene type direction distance location
hps4 hps4,LOC102793116 coding downstream 2188 2670234 ~ 2683703 (-)
si:ch211-170d8.2 NA coding downstream 14796 2667262 ~ 2671095 (-)
ggt5a ggt5 coding downstream 58130 2619215 ~ 2627761 (-)
LOC120560454 NA coding downstream 133197 2551428 ~ 2552694 (-)
LOC120560452 LOC104959125 coding downstream 148332 2537218 ~ 2537559 (-)
LOC120561357 NA coding upstream 164221 2853308 ~ 2855703 (-)
zgc:162952 LOC103356462,LOC104930869,LOC101468259,LOC102311328,LOC100693656 coding upstream 326522 3015609 ~ 3042256 (-)
b3galt8 NA coding upstream 356589 3045676 ~ 3047802 (-)
traf2a traf1,LOC106956159,LOC103356465,LOC106930528,LOC103141905,LOC108249884,LOC102784265 coding upstream 507399 3196486 ~ 3211999 (-)
LOC120561362 NA coding upstream 583364 3272451 ~ 3293307 (-)
G58625 NA non-coding downstream 129028 2556645 ~ 2556863 (-)
G58596 NA non-coding downstream 167690 2517955 ~ 2518201 (-)
LOC120561196 NA non-coding downstream 194097 2491267 ~ 2491794 (-)
G58588 NA non-coding downstream 206283 2476272 ~ 2479608 (-)
G58560 NA non-coding downstream 350869 2334746 ~ 2335022 (-)
G58678 NA non-coding upstream 26814 2715901 ~ 2716316 (-)
G58716 NA non-coding upstream 112655 2801742 ~ 2801971 (-)
G58725 NA non-coding upstream 124284 2813371 ~ 2813695 (-)
G58748 NA non-coding upstream 184268 2873355 ~ 2873629 (-)
G58806 NA non-coding upstream 310112 2999199 ~ 2999415 (-)
ggt1a ggt1,LOC102775580,LOC108234964 other downstream 93145 2577875 ~ 2592746 (-)
LOC120560995 NA other downstream 134525 2550046 ~ 2551366 (-)
ankrd39 LOC103353637,LOC100700369 other downstream 546248 2137796 ~ 2139643 (-)
rimbp2 rimbp2,LOC107081823,LOC108247306,LOC103353655 other downstream 1027843 1532053 ~ 1658048 (-)
LOC120560045 NA other downstream 2660942 17589 ~ 24949 (-)
LOC120561394 LOC107097799,LOC103353613,LOC101077666 other upstream 1523 2690610 ~ 2692543 (-)
LOC120561349 donson,LOC102310661 other upstream 145101 2834188 ~ 2846607 (-)
tnc tnc,LOC104930867,LOC103356464 other upstream 360582 3049669 ~ 3134549 (-)
si:ch211-102c2.4 NA other upstream 543519 3232606 ~ 3240063 (-)
G58919 NA other upstream 708082 3397169 ~ 3397496 (-)

Expression


Co-expression Network