G58679



Basic Information


Item Value
gene id G58679
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 2716728 ~ 2716938 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU78864
ggtccctagaCGCTCGGATGAAAGCTGAACGCTCACAGGGGTGCATTGCATTCATTCACATATGTAGACGGTACTTTCGGATAAAAACCGGGTTGTAGCTTGTTGTCTACCTTCCTACGGTTAGATAGAGCTGCCTATTGTGTAAGTAACACGTTTCGCTTATGATTTATTGAACCGCAAACCCGCGAATCTTGCGAATCTGCCAATTTCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU78864 True 211 lncRNA 0.45 1 2716728 2716938

Neighbor


gene id symbol gene type direction distance location
mlec mlec coding upstream 54278 2656511 ~ 2662450 (+)
cabp1a cabp1,LOC100709699,LOC102206763,LOC102781601,LOC104946293 coding upstream 62131 2640152 ~ 2654597 (+)
asphd2 asphd2 coding upstream 82045 2630504 ~ 2634683 (+)
lrrc75ba lrrc75b,LOC104956515,LOC102775864 coding upstream 99755 2600890 ~ 2616973 (+)
anapc5 anapc5,LOC102800026 coding upstream 139678 2560749 ~ 2577050 (+)
LOC120561358 LOC104949113 coding downstream 167823 2884761 ~ 2889848 (+)
LOC120561351 NA coding downstream 180602 2897540 ~ 2913826 (+)
nsmfb nsmf,LOC101467740,LOC102197052,LOC102311847 coding downstream 221091 2938029 ~ 2993038 (+)
rabl6b rabl6 coding downstream 497651 3214589 ~ 3234118 (+)
imp4 imp4 coding downstream 523191 3240129 ~ 3245982 (+)
G58673 NA non-coding upstream 10589 2705813 ~ 2706139 (+)
G58653 NA non-coding upstream 48051 2668086 ~ 2668677 (+)
G58652 NA non-coding upstream 48893 2667258 ~ 2667835 (+)
G58651 NA non-coding upstream 49687 2665818 ~ 2667041 (+)
G58650 NA non-coding upstream 51037 2663403 ~ 2665691 (+)
LOC120561019 NA non-coding downstream 16602 2733540 ~ 2735823 (+)
G58710 NA non-coding downstream 81647 2798585 ~ 2798813 (+)
LOC120561363 NA non-coding downstream 86603 2803541 ~ 2804656 (+)
G58723 NA non-coding downstream 93928 2810866 ~ 2811277 (+)
G58726 NA non-coding downstream 96986 2813924 ~ 2814531 (+)
dock5 dock5 other upstream 404063 2273678 ~ 2312665 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other upstream 1878867 789405 ~ 837861 (+)
LOC120560799 NA other upstream 2504345 210742 ~ 212383 (+)
lman2lb NA other downstream 161436 2878374 ~ 2883861 (+)
LOC120560521 tjp2 other downstream 718227 3435165 ~ 3522756 (+)
G59086 NA other downstream 1400341 4117279 ~ 4117631 (+)
G59172 sub1 other downstream 1707203 4424141 ~ 4429981 (+)
trnal-aag_1 NA other downstream 1715233 4432171 ~ 4432253 (+)

Expression



Co-expression Network