G58710



Basic Information


Item Value
gene id G58710
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 2798585 ~ 2798813 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU78898
GATTAACCCCTTAACACTCCTGTAAAATTAGCCAAAAACGCCTATCCAAGGCATACCCATAGTAAATTGGAAGCTGTTCTTGAACCATTTGTTCTACATGCATGTTTATGGTTTCTTTTGAAAGGTAACACTCTGAGGCTTCTTTCCCAACAGTTAGAATTAATGTAAGTGCTATTGGCTTTGAGTAATAGAAGTTTGAATATactggaaaatattttttttatgtccg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU78898 True 229 lncRNA 0.35 1 2798585 2798813

Neighbor


gene id symbol gene type direction distance location
mlec mlec coding upstream 136135 2656511 ~ 2662450 (+)
cabp1a cabp1,LOC100709699,LOC102206763,LOC102781601,LOC104946293 coding upstream 143988 2640152 ~ 2654597 (+)
asphd2 asphd2 coding upstream 163902 2630504 ~ 2634683 (+)
lrrc75ba lrrc75b,LOC104956515,LOC102775864 coding upstream 181612 2600890 ~ 2616973 (+)
anapc5 anapc5,LOC102800026 coding upstream 221535 2560749 ~ 2577050 (+)
LOC120561358 LOC104949113 coding downstream 85948 2884761 ~ 2889848 (+)
LOC120561351 NA coding downstream 98727 2897540 ~ 2913826 (+)
nsmfb nsmf,LOC101467740,LOC102197052,LOC102311847 coding downstream 139216 2938029 ~ 2993038 (+)
rabl6b rabl6 coding downstream 415776 3214589 ~ 3234118 (+)
imp4 imp4 coding downstream 441316 3240129 ~ 3245982 (+)
LOC120561019 NA non-coding upstream 62762 2733540 ~ 2735823 (+)
G58679 NA non-coding upstream 81647 2716728 ~ 2716938 (+)
G58673 NA non-coding upstream 92446 2705813 ~ 2706139 (+)
G58653 NA non-coding upstream 129908 2668086 ~ 2668677 (+)
G58652 NA non-coding upstream 130750 2667258 ~ 2667835 (+)
LOC120561363 NA non-coding downstream 4728 2803541 ~ 2804656 (+)
G58723 NA non-coding downstream 12053 2810866 ~ 2811277 (+)
G58726 NA non-coding downstream 15111 2813924 ~ 2814531 (+)
LOC120561364 NA non-coding downstream 23066 2821879 ~ 2829531 (+)
G58745 NA non-coding downstream 49578 2848391 ~ 2848850 (+)
dock5 dock5 other upstream 485920 2273678 ~ 2312665 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other upstream 1960724 789405 ~ 837861 (+)
LOC120560799 NA other upstream 2586202 210742 ~ 212383 (+)
lman2lb NA other downstream 79561 2878374 ~ 2883861 (+)
LOC120560521 tjp2 other downstream 636352 3435165 ~ 3522756 (+)
G59086 NA other downstream 1318466 4117279 ~ 4117631 (+)
G59172 sub1 other downstream 1625328 4424141 ~ 4429981 (+)
trnal-aag_1 NA other downstream 1633358 4432171 ~ 4432253 (+)

Expression



Co-expression Network