G58745



Basic Information


Item Value
gene id G58745
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 2848391 ~ 2848850 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU78937
agtgggacacaatcatgaagtggaacgaaatttattggatatttcaaacctttataacaaataaaaaacaaaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaccttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatagaatccacctgtgtgtaatcaagtctccgtataaatgcacctgctctgtgatagtctcagaggtccgtttaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgagatactgttgtggagaagtttaaagccagatttggatacaaaaagatttcccaagctttaaacatcccaaggagcactgtgcaagcgataatattgaaatggaaggagtatcagaccactgcaaatctacgaagacccggccgtccc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU78937 True 460 lncRNA 0.41 1 2848391 2848850

Neighbor


gene id symbol gene type direction distance location
mlec mlec coding upstream 185941 2656511 ~ 2662450 (+)
cabp1a cabp1,LOC100709699,LOC102206763,LOC102781601,LOC104946293 coding upstream 193794 2640152 ~ 2654597 (+)
asphd2 asphd2 coding upstream 213708 2630504 ~ 2634683 (+)
lrrc75ba lrrc75b,LOC104956515,LOC102775864 coding upstream 231418 2600890 ~ 2616973 (+)
anapc5 anapc5,LOC102800026 coding upstream 271341 2560749 ~ 2577050 (+)
LOC120561358 LOC104949113 coding downstream 35911 2884761 ~ 2889848 (+)
LOC120561351 NA coding downstream 48690 2897540 ~ 2913826 (+)
nsmfb nsmf,LOC101467740,LOC102197052,LOC102311847 coding downstream 89179 2938029 ~ 2993038 (+)
rabl6b rabl6 coding downstream 365739 3214589 ~ 3234118 (+)
imp4 imp4 coding downstream 391279 3240129 ~ 3245982 (+)
LOC120561364 NA non-coding upstream 18860 2821879 ~ 2829531 (+)
G58726 NA non-coding upstream 33860 2813924 ~ 2814531 (+)
G58723 NA non-coding upstream 37114 2810866 ~ 2811277 (+)
LOC120561363 NA non-coding upstream 43735 2803541 ~ 2804656 (+)
G58710 NA non-coding upstream 49578 2798585 ~ 2798813 (+)
G58761 NA non-coding downstream 43526 2892376 ~ 2892715 (+)
G58778 NA non-coding downstream 193289 3042139 ~ 3042443 (+)
G58780 NA non-coding downstream 199905 3048755 ~ 3049029 (+)
G58793 NA non-coding downstream 224813 3073663 ~ 3074232 (+)
G58817 NA non-coding downstream 307212 3156062 ~ 3156295 (+)
dock5 dock5 other upstream 535726 2273678 ~ 2312665 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other upstream 2010530 789405 ~ 837861 (+)
LOC120560799 NA other upstream 2636008 210742 ~ 212383 (+)
lman2lb NA other downstream 29524 2878374 ~ 2883861 (+)
LOC120560521 tjp2 other downstream 586315 3435165 ~ 3522756 (+)
G59086 NA other downstream 1268429 4117279 ~ 4117631 (+)
G59172 sub1 other downstream 1575291 4424141 ~ 4429981 (+)
trnal-aag_1 NA other downstream 1583321 4432171 ~ 4432253 (+)

Expression



Co-expression Network