G58817



Basic Information


Item Value
gene id G58817
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 3156062 ~ 3156295 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>TU79047
gttttaagtgaatgcaccgtctgtgttgtttaattccgacaacggcagctgcaagtgaacgcaccgtctgtgttgtttaattccaacaacggcagctgcaagtgaacgcaccgtctgtgttgtttaattccgacaacggcagctgcaagtgaacgcaccgtctgtgttgtttaattccgacaacggcagctgcaagtgaacgcaccgtctgtgttgttgaattccgaccatata

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU79047 True 234 lncRNA 0.48 1 3156062 3156295

Neighbor


gene id symbol gene type direction distance location
nsmfb nsmf,LOC101467740,LOC102197052,LOC102311847 coding upstream 163024 2938029 ~ 2993038 (+)
LOC120561351 NA coding upstream 242236 2897540 ~ 2913826 (+)
LOC120561358 LOC104949113 coding upstream 266214 2884761 ~ 2889848 (+)
mlec mlec coding upstream 493612 2656511 ~ 2662450 (+)
cabp1a cabp1,LOC100709699,LOC102206763,LOC102781601,LOC104946293 coding upstream 501465 2640152 ~ 2654597 (+)
rabl6b rabl6 coding downstream 58294 3214589 ~ 3234118 (+)
imp4 imp4 coding downstream 83834 3240129 ~ 3245982 (+)
zfr zfr,LOC103397483,LOC102308294 coding downstream 91159 3247454 ~ 3270107 (+)
hmgcra hmgcr coding downstream 201848 3358143 ~ 3371500 (+)
fxn fxn coding downstream 219586 3375881 ~ 3383580 (+)
G58793 NA non-coding upstream 81830 3073663 ~ 3074232 (+)
G58780 NA non-coding upstream 107033 3048755 ~ 3049029 (+)
G58778 NA non-coding upstream 113619 3042139 ~ 3042443 (+)
G58761 NA non-coding upstream 263347 2892376 ~ 2892715 (+)
G58745 NA non-coding upstream 307212 2848391 ~ 2848850 (+)
G58819 NA non-coding downstream 9318 3165613 ~ 3165841 (+)
G58892 NA non-coding downstream 240858 3397153 ~ 3397790 (+)
G58893 NA non-coding downstream 258809 3415104 ~ 3415416 (+)
G58898 NA non-coding downstream 333496 3489791 ~ 3490092 (+)
G58899 NA non-coding downstream 338809 3495104 ~ 3495899 (+)
lman2lb NA other upstream 272201 2878374 ~ 2883861 (+)
dock5 dock5 other upstream 843397 2273678 ~ 2312665 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other upstream 2318201 789405 ~ 837861 (+)
LOC120560799 NA other upstream 2943679 210742 ~ 212383 (+)
LOC120560521 tjp2 other downstream 278870 3435165 ~ 3522756 (+)
G59086 NA other downstream 960984 4117279 ~ 4117631 (+)
G59172 sub1 other downstream 1267846 4424141 ~ 4429981 (+)
trnal-aag_1 NA other downstream 1275876 4432171 ~ 4432253 (+)
trnaq-uug_2 NA other downstream 1276373 4432668 ~ 4432739 (+)

Expression



Co-expression Network