G58852


Basic Information

Item Value
gene id G58852
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 3246081 ~ 3246397 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU79098
TTCAAAATCACATCAAATCATAAAATCCTGAAGTTCTTCAAAACAAGCTTTTGAGAATGTGAGGTTTGCCCAAGAAGAGACAGCGATTTCATCGATATCAATTTCTTTGAAACAGAAGAAATAAGACCATACTAGAGATCAGACTGGATGACTGCACAGTAGAAGTGGAACTGTCGGagtaataacaagcatttctttCTCCTGGCCCCTATCTCGGTTTAGTTATGTAAATGAACTACACCACACATAAAGCAGGAAGAATGCACCGCTACCATTacacaaataataaatacagtGGCAGACTTGCATTGTTATTT

Function

GO: NA

KEGG:

id description
ko04341 Hedgehog signaling pathway - fly

RNA

RNA id representative length rna type GC content exon number start site end site
TU79098 True 317 lncRNA 0.37 1 3246081 3246397

Neighbor

gene id symbol gene type direction distance location
traf2a traf1,LOC106956159,LOC103356465,LOC106930528,LOC103141905,LOC108249884,LOC102784265 coding downstream 34082 3196486 ~ 3211999 (-)
b3galt8 NA coding downstream 198279 3045676 ~ 3047802 (-)
zgc:162952 LOC103356462,LOC104930869,LOC101468259,LOC102311328,LOC100693656 coding downstream 203825 3015609 ~ 3042256 (-)
LOC120561357 NA coding downstream 390378 2853308 ~ 2855703 (-)
hps4 hps4,LOC102793116 coding downstream 562378 2670234 ~ 2683703 (-)
LOC120561362 NA coding upstream 26054 3272451 ~ 3293307 (-)
LOC120561352 gcnt4 coding upstream 64670 3311067 ~ 3315203 (-)
LOC120561346 NA coding upstream 69419 3315816 ~ 3354947 (-)
apba1a apba1 coding upstream 308676 3555073 ~ 3603158 (-)
ptar1 ptar1 coding upstream 359998 3606395 ~ 3621480 (-)
G58818 NA non-coding downstream 83954 3161885 ~ 3162127 (-)
G58807 NA non-coding downstream 232700 3011390 ~ 3013381 (-)
G58806 NA non-coding downstream 246666 2999199 ~ 2999415 (-)
G58748 NA non-coding downstream 372452 2873355 ~ 2873629 (-)
G58725 NA non-coding downstream 432386 2813371 ~ 2813695 (-)
G58922 NA non-coding upstream 188815 3435212 ~ 3467122 (-)
G58931 NA non-coding upstream 241566 3487963 ~ 3488550 (-)
G58932 NA non-coding upstream 243408 3489805 ~ 3490230 (-)
G58933 NA non-coding upstream 244323 3490720 ~ 3492557 (-)
G58935 NA non-coding upstream 249847 3496244 ~ 3496596 (-)
si:ch211-102c2.4 NA other downstream 6018 3232606 ~ 3240063 (-)
tnc tnc,LOC104930867,LOC103356464 other downstream 111532 3049669 ~ 3134549 (-)
LOC120561349 donson,LOC102310661 other downstream 399474 2834188 ~ 2846607 (-)
LOC120561394 LOC107097799,LOC103353613,LOC101077666 other downstream 553538 2690610 ~ 2692543 (-)
si:ch211-107p11.3 LOC103353652,LOC102075650,LOC108234931,LOC104950460 other downstream 556994 2685891 ~ 2689087 (-)
G58919 NA other upstream 150772 3397169 ~ 3397496 (-)
G58920 LOC106099046,LOC107687292,LOC107712180,LOC107663003 other upstream 169230 3415627 ~ 3416854 (-)
G58994 NA other upstream 442232 3688629 ~ 3689338 (-)
golph3a golph3,LOC103397487,LOC108249570 other upstream 963351 4209748 ~ 4224568 (-)
sub1b sub1 other upstream 1177752 4424149 ~ 4430090 (-)

Expression


Co-expression Network