G58892


Basic Information

Item Value
gene id G58892
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 3397153 ~ 3397790 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU79148
gttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacatgatgagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcgattttggtttcatctgaccacagcaccttcttccacatgtttggtgtgtctcccaggtggcttttggcaaactttaaacgacactttatggatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcagtatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcatgggcctcttggctgcatctctgatcagtcttctcattgtatgagctgaaagtttagagggacggccgggtcttcgtagatttgtagtggtctgatacgccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttg

Function

GO:

id name namespace
GO:0000041 transition metal ion transport biological_process
GO:0006826 iron ion transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79148 True 617 lncRNA 0.45 2 3397153 3397790

Neighbor

gene id symbol gene type direction distance location
fxn fxn coding upstream 13573 3375881 ~ 3383580 (+)
hmgcra hmgcr coding upstream 25653 3358143 ~ 3371500 (+)
zfr zfr,LOC103397483,LOC102308294 coding upstream 127046 3247454 ~ 3270107 (+)
imp4 imp4 coding upstream 151171 3240129 ~ 3245982 (+)
rabl6b rabl6 coding upstream 163035 3214589 ~ 3234118 (+)
fam189a2 LOC104953220 coding downstream 127517 3525307 ~ 3547333 (+)
mamdc2a mamdc2 coding downstream 232946 3630736 ~ 3675225 (+)
arid3c LOC103046366,LOC105901092,LOC107676636,LOC107552548,LOC108438346 coding downstream 290255 3688045 ~ 3775673 (+)
LOC120561175 ube2l3,LOC106562742,LOC104961333,LOC107396654,LOC102226353,LOC107088009,LOC108248341 coding downstream 420532 3818322 ~ 3827427 (+)
rad17 rad17,LOC102794325 coding downstream 450689 3848479 ~ 3868576 (+)
G58819 NA non-coding upstream 231312 3165613 ~ 3165841 (+)
G58817 NA non-coding upstream 240858 3156062 ~ 3156295 (+)
G58793 NA non-coding upstream 322921 3073663 ~ 3074232 (+)
G58780 NA non-coding upstream 348124 3048755 ~ 3049029 (+)
G58778 NA non-coding upstream 354710 3042139 ~ 3042443 (+)
G58893 NA non-coding downstream 17314 3415104 ~ 3415416 (+)
G58898 NA non-coding downstream 92001 3489791 ~ 3490092 (+)
G58899 NA non-coding downstream 97314 3495104 ~ 3495899 (+)
G58900 NA non-coding downstream 106661 3504451 ~ 3504749 (+)
G58941 NA non-coding downstream 125056 3522846 ~ 3523621 (+)
lman2lb NA other upstream 513292 2878374 ~ 2883861 (+)
dock5 dock5 other upstream 1084488 2273678 ~ 2312665 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other upstream 2559292 789405 ~ 837861 (+)
LOC120560799 NA other upstream 3184770 210742 ~ 212383 (+)
LOC120560521 tjp2 other downstream 37375 3435165 ~ 3522756 (+)
G59086 NA other downstream 719489 4117279 ~ 4117631 (+)
G59172 sub1 other downstream 1026351 4424141 ~ 4429981 (+)
trnal-aag_1 NA other downstream 1034381 4432171 ~ 4432253 (+)
trnaq-uug_2 NA other downstream 1034878 4432668 ~ 4432739 (+)

Expression


Co-expression Network