G58920 (LOC106099046,LOC107687292,LOC107712180,LOC107663003)


Basic Information

Item Value
gene id G58920
gene name LOC106099046,LOC107687292,LOC107712180,LOC107663003
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 3415627 ~ 3416854 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU79177
GTGGACCATGTCATCAACCATGGCCTGACTATTAGGGAAGCTGGGCAGAGAGTCCACCCACATCTAAGCCGCTTCACAGTGGCATCTGTAATAAGAACATTCCGACTAGAAAACAGAATGACTAGAAGACCTTCTGGGGGAGGACGCCAACGCCTGTTCACACAACAGCAGGAACTTACCATTATGGACCTAGTGAGGGCAGACAATGCCATCCATCTCCACCAGCCACGACAGAAAATACTTGCAGACAGGCAAGTGTTCAACAACATAGACCATGTGAGCATCACCACCATCAGacgcatcttgggaaaacacaaCATCACCATGAAGCAGATCTACAGGGTCCCATTTCAGAGGAACAGTGTCCGGGTCAAAGGACTTCGAGCTGAATATGTACGGagAATCTTGGCCATGGATGGAGCTGCACAGCCTCATGAATTCATTTTCATTGATGAAGCTGGATTCGACCTGAGCAAAACAAGACGACGGGGTCGTAATGTAATTGGCCACAGGGCAATTGTGAATGTCCCGGGGCAGCGCGGGGGTAATATTACATTGTGTGCCGCCATAAGCCTTCGAGGGGTTCTGCATCATCATGCAAAACTAGGTCCATACAATAGCCAACATATACTCACATTTCTAGATGCTCTCCATAATATAGTTGTACAGAACAGACCAGATCAGCCCAGGTTTGTGGTGGTATGGGATAATGTCAGTTTCCATCGGGCTGCTCTGGTCCAGGCCTGGTTCACCAACCACAATCAATTTGAAGTGGTATACTTGCC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106099046

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79177 True 785 TUCP 0.48 3 3415627 3416854

Neighbor

gene id symbol gene type direction distance location
LOC120561346 NA coding downstream 60680 3315816 ~ 3354947 (-)
LOC120561352 gcnt4 coding downstream 100424 3311067 ~ 3315203 (-)
LOC120561362 NA coding downstream 122320 3272451 ~ 3293307 (-)
traf2a traf1,LOC106956159,LOC103356465,LOC106930528,LOC103141905,LOC108249884,LOC102784265 coding downstream 203628 3196486 ~ 3211999 (-)
b3galt8 NA coding downstream 367825 3045676 ~ 3047802 (-)
apba1a apba1 coding upstream 138219 3555073 ~ 3603158 (-)
ptar1 ptar1 coding upstream 189541 3606395 ~ 3621480 (-)
pias2 pias2 coding upstream 382178 3799032 ~ 3816820 (-)
ydjc ydjc coding upstream 413492 3830346 ~ 3844040 (-)
ak6 ak6 coding upstream 427788 3844642 ~ 3848510 (-)
G58852 NA non-coding downstream 169230 3246081 ~ 3246397 (-)
G58818 NA non-coding downstream 253500 3161885 ~ 3162127 (-)
G58807 NA non-coding downstream 402246 3011390 ~ 3013381 (-)
G58806 NA non-coding downstream 416212 2999199 ~ 2999415 (-)
G58748 NA non-coding downstream 541998 2873355 ~ 2873629 (-)
G58922 NA non-coding upstream 18358 3435212 ~ 3467122 (-)
G58931 NA non-coding upstream 71109 3487963 ~ 3488550 (-)
G58932 NA non-coding upstream 72951 3489805 ~ 3490230 (-)
G58933 NA non-coding upstream 73866 3490720 ~ 3492557 (-)
G58935 NA non-coding upstream 79390 3496244 ~ 3496596 (-)
G58919 NA other downstream 18131 3397169 ~ 3397496 (-)
si:ch211-102c2.4 NA other downstream 175564 3232606 ~ 3240063 (-)
tnc tnc,LOC104930867,LOC103356464 other downstream 281078 3049669 ~ 3134549 (-)
LOC120561349 donson,LOC102310661 other downstream 569020 2834188 ~ 2846607 (-)
LOC120561394 LOC107097799,LOC103353613,LOC101077666 other downstream 723084 2690610 ~ 2692543 (-)
G58994 NA other upstream 271775 3688629 ~ 3689338 (-)
golph3a golph3,LOC103397487,LOC108249570 other upstream 792894 4209748 ~ 4224568 (-)
sub1b sub1 other upstream 1007295 4424149 ~ 4430090 (-)
LOC120560375 NA other upstream 1015990 4432844 ~ 4436316 (-)
LOC120561493 NA other upstream 2049369 5466223 ~ 5466437 (-)

Expression


Co-expression Network