G58986


Basic Information

Item Value
gene id G58986
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 3799038 ~ 3803097 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU79263
ACCACAATTTAAAATGCTGCAAGTTTACAGATACAGGAAAACAAAGACAATTTTGTAATAAACCATCTTGTTATAAACCTCGTGAGTACTTTTCTCGGAGTCTGTTAACATGGTGTCACAAGAGAAAGGTCCAAGTGATCTGGGTTGTGTTTCAAAGCCCATAAAGTGTGAAGAgtacaaaataaagaaatatccACATCACCAACATCTGGCCGCAGGTGAATAGAGACGGAGTCAAACGTCTAATCagtagggatgggcatcgtttggattttaacgattctgattccaattccgattcttcctttcgattccggttcttatcgattctcgattccgattctttgagtggtggagttgaaacgggttagatgcttatttcacaaataagaggaaagttttattttgaatcataggtgggttgcagttttacagcttttacaatgcaaaataaagccacactagagctccgGTTACTGTACAACACAACAAGTGCCTGGCttctacggaaaccaaaacttgcgcatattaaatttggaacctatgatcagatttgaaaccaaatcctccaaacgattccaataaagaaactattccaatggaatcgtaatttttgaaacgattccgattaggaatcaGTTCTCGATCCCCAACCCTACTAATCAGTAATTCCACAAAGCAGTGACCTCTATGCAAACACTAATGCAGGGTTTCTTCTatcggatgttttttttttacttcaaggGTTGGTTCACCAAAATTACAAAATCATATTTTCTAACCTCCCACCAGCGCTATCTCTACATGCAGATATAGTCTGGGTTTTAAGATTCCTGCCTCTACCCCAATACAATGGAAGAGAATGGGATTCTGTTTCCATAGTTCTAATCAAGATTGTCTCCAGACTAACAGGGAAACTGCTTCTGGAAAAAATGTGTTGAATTTTTGCAATGTCATTTGTCAACTGATTTCCAAGTGAGTGATATCTCAGAGACAGACATCTCAAAACCTGTTCACATAAACTAAAACCATCCGCATAAATGGGATACAACTAAAGCTAAGTGAGTTTgtgttttgtaatttgggtgaactgttATCACAGCCTTAACATGGAAACTGCCAACAGTCATTAGCATGATTGAATTAAACAGATACATTGATGTTATACATTAGCCTAACCTTTACATCACCATCTGTATTTCAGTCagggattttaactgttgtTTCTATGCACCGGTATTTTAATTCACTCAGTCCGTCAAGCCCAGAAAAGTGGAGTGTAGGTCCCTGAGATTGAGCTCCTGATGGCCGTCAGTCCACATGCACAGCAAGCAGTCCAGATAAGATAATGTAGGTGTGATACAGTAGCTGCCCTGTGTATCCTTCTTTATCTTACTAAGTGGTGACAACTTTGAGAAAGGAAATGTTCATGTACATCCATCCCAAACTAACACACAGCATCATCAACATACAACAAAGTCCAAATACAGCAGAGGCCAGCGCTCAGAGGAATTACAGAGAGGACTTTTAAATATTAACTGAAGAGAACATAATCTGACTTTTGGCAGCATGAACTTTTTCGGATATTTTGCACCAACTTAGAGGCAAACATACTCTTTCATTCACATTATGTTCAAATTCACTGAACCGCCTCATGCTTGTCTAACGTgtgtacttttcttttttttggagcAGAGCTGCTCGGGAACACAAAATTAATTTCAGTGTAAACTAATAAAGTTGATTTGTATGAGAGTCAAAACTGATGGAAGCAAGGAACAGTTAACATTTTGGGAACTAAACTTGTTGACTTTCTTTCTGAGCATAAGATGAGAAAATGAATATTAATCTCATGTCTGTTTTAAGCACAGAGCTGGAGTCAGGacgtggttagcctagcttagcataaagactggacagAGGAGGAGACCGCTAGCTCGGGGCAAACACAATCTGTAGTTCATACATTTCCGTTTGTGTAAGGAGCACACAAATGGGACATATTCATCAGTGAGCTTTGGAGGTGTTGGTAGGACAGAGCCCTGCTTCCAGCCATGCTAAGCTAGGCTTACCATGCCCTGACTCCAGGTCTGTACTTACAGACATTAGATTGATATCCATCTGAACATCTCAATCACCGCAAATGAGCATAATCGCCTGAGTTTTGAACTATTGCTTTAAGTATATTTATCTTCAAAATCATGTTTACAACTTATATAAGCCAATAAACCACCATACACAAAAAAGGGATCCAATTTGGGAGGCAGAGCATACCATCTTAGAATCATTTATGCAGCATCTGAACTACATTGACAACTTTATTTAACCTAACATGAGTTAAATTATTGCTCTGACTAAATGACAAAAGGAACATTTTACATTGGTTTGCCATGAAAGCTGCCCTGTAATCAACCTCACTGAAGAACTGACAGCTGTTAGAACCAATGAAAACATCTCAATTACTGACCTGCCGACCATGTTCACAGTCAACAGTATGTTTATCAGTCTCTCATCTAACCGTTAGTTTGCTTGCATGGTTGTTGTGTGAAACAAAGTCTTGCTGAGAGCAGTGAGTTCACGCTCGTCTTCCATCCGTCCTGACTCTGCTCCATGCTAACCAGGCCAGGAGAGGCTGAAGTCAGAGTCACGTGTATGTTCAAAGAAACAAATCGGTATAAATGAGGAGCTCAATGCTCTAAATATTTCCAACACTGGAAcaactgggggaaaaaagtatAACAGACATCTTTCTGCCAGGAAGACCTCTACAGAGCTGAGCATGGAAGAGTTATTGTAATATTTCTACACCTATATATGGGAGGCCAAAAGACTAGCTGCTCATGTCATAATGATACTGTATGATGGCATACTACTGATTAAAGTTCCCCGGgcaatattttttatatgaaGACTAAAATAAAATGACTCCCTGTAACATGAAAGGATTGCCAGTTCCACTGATACCACCGAGCGTCTGCTCCCTGCATGGCACACAATGGCACAGAGCAGACTCTATGAGTGGTGGGTAAAGAGAGCAACCAGAGGGATACAGAGACTAAAACAAGGTTAAACACTGGGGAAATGTTGGACTTAAGccaggctaaaacaatggagAAATACTGGACTAAACCAATTTCTAAAACACTGGGGATATATTGGACTAAACCAATGCTATAACAATGGGAAAATATTGGACTAAACAATTACATTTCAGTTTAAATAAACGTTTTGCTGTTTTGTCAGGGTTGAACGTGCCCCAGGGAATATTGGACTAAACTAAGGCTGAAATACCTGGCAACAATGGACTAAACCAAGGCTGAAATACCAGGGAATATTGGACTAAACCAAGGCTGAAATACCAGGGAATATTGGACTAAACCAAGGCTAAAACACCAGGGGAAATTGGACTTAACCAATGCTAAATCCTTCCCATTGTTTAGATCGAATGTGATTAAGGTAAGTATGGCAGCACACGAGAATATTTCCAAATCAGAATCCGAATGAAATGTTAAAGTCAAGAGTACTTCAAGAGAAATGACAATACACTGACATACAATATTGTCCTTGGGCATCAAACCATTTATCGTCCTACCATAGCAGATAGGATGCCAAACCCATTtgcaagtataaaaaaaaaaaaaaacaacatgccTGGATACAGTTTTTTAACATCATGAAATTTTCCAGGCCAGCAAAGAACTCATGTATACCAATCTGGGTGCTCTTGTGTAAAACTCAACATGGCATGTACACATAGTCCGCACTAAAAAGGCCACAGAAAACAGGCCTGAAAAGGTCCAGTGAGACGTGGCTCAGTCTAGTGAAATTATATCTGATATGCCGCTGTCAGCCCCTCCTCCAGCGCCCCCTCCCCCTGTGATGACCCGGGTCTCGTGGAGGGAGCTGGCGGCGTGGCTGCTGGTGTCGTAGTGGCTGCTGGAGGAGGACACCAGGGCTGAGCTGGTGCTGGCTGCGGCTGCACTCTGCATGCTGCTCGTCAGGTTGTCCAGAAACATCTGTGGCCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79263 True 4026 lncRNA 0.41 2 3799038 3803097

Neighbor

gene id symbol gene type direction distance location
arid3c LOC103046366,LOC105901092,LOC107676636,LOC107552548,LOC108438346 coding upstream 23365 3688045 ~ 3775673 (+)
mamdc2a mamdc2 coding upstream 123813 3630736 ~ 3675225 (+)
fam189a2 LOC104953220 coding upstream 251705 3525307 ~ 3547333 (+)
fxn fxn coding upstream 415458 3375881 ~ 3383580 (+)
hmgcra hmgcr coding upstream 427538 3358143 ~ 3371500 (+)
LOC120561175 ube2l3,LOC106562742,LOC104961333,LOC107396654,LOC102226353,LOC107088009,LOC108248341 coding downstream 15225 3818322 ~ 3827427 (+)
rad17 rad17,LOC102794325 coding downstream 45382 3848479 ~ 3868576 (+)
ccdc125 NA coding downstream 65936 3869033 ~ 3889655 (+)
si:dkey-3h3.3 NA coding downstream 396426 4199523 ~ 4208499 (+)
LOC120560812 thg1l,LOC106912903,LOC103154062 coding downstream 422939 4226036 ~ 4227032 (+)
G58948 NA non-coding upstream 192729 3606062 ~ 3606309 (+)
G58944 NA non-coding upstream 242859 3547808 ~ 3556179 (+)
G58941 NA non-coding upstream 275417 3522846 ~ 3523621 (+)
G58900 NA non-coding upstream 294289 3504451 ~ 3504749 (+)
G58899 NA non-coding upstream 303139 3495104 ~ 3495899 (+)
LOC120561177 NA non-coding downstream 34210 3837307 ~ 3837679 (+)
G59033 NA non-coding downstream 87948 3891045 ~ 3891853 (+)
G59032 NA non-coding downstream 92573 3895670 ~ 3896241 (+)
G59042 NA non-coding downstream 157963 3961060 ~ 3961319 (+)
G59093 NA non-coding downstream 329751 4132848 ~ 4133064 (+)
LOC120560521 tjp2 other upstream 276282 3435165 ~ 3522756 (+)
lman2lb NA other upstream 915177 2878374 ~ 2883861 (+)
dock5 dock5 other upstream 1486373 2273678 ~ 2312665 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other upstream 2961177 789405 ~ 837861 (+)
LOC120560799 NA other upstream 3586655 210742 ~ 212383 (+)
G59086 NA other downstream 314182 4117279 ~ 4117631 (+)
G59172 sub1 other downstream 621044 4424141 ~ 4429981 (+)
trnal-aag_1 NA other downstream 629074 4432171 ~ 4432253 (+)
trnaq-uug_2 NA other downstream 629571 4432668 ~ 4432739 (+)
mrpl41 mrpl41 other downstream 726957 4530054 ~ 4531165 (+)

Expression


Co-expression Network