G59217


Basic Information

Item Value
gene id G59217
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 4554021 ~ 4555654 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU79552
taagaagttccccatacttttagagttacacagcacattggccaggagtcatacttgacgcctcctagcctatctcaaacatctctctcagataaggccagggatggttgggaatgtcttgctgcttgtctgcctaatctctgggatctctgttttcttcattttcaatcatgtcgccgtccatactactagtgctaacgttaccaccatcaagctgcaattatttgccgcaaatgaatgcagaatgcggccgaatctgtcgagtcgtcttgtagtggtgcgttacatgcaatgtagcctacagtatattcccatccaattagattgaattcggtattgatcacgtgaaaaataataacggtaactccagtgaaattatttgaaacttgctagtgaggactagattaggaccgtatttatagctgatgctggtttcaaacttcgcgCCCCCCCCCATGGGGGggctgtaaaacacggacagagacaacttctttcttttgatgctttacaagcaacgtgaaacctagctaacaggtgaagaacacaaacaactaaatcactagctaacctactttaactgtgcaggaactatagaccaatacaacaacaggcttaaatgaactgacaacataagttatacgacttacagttctcaaggacgcacacacaccatctcaactgattatcctccggacagcagtctctttttctcacatttttttctgcgtccgcgctattctccgacattacgacctcttgtacaaaactaaagtaacgagccaattttttaaatgtaaggagtagaaagtaccgatattcgtgttaaaatgtaaggagtaaaagtaaaaagtcgccacaaaaaaaaatagtaaagtaaagtagaaatatccgaaaaatctacttaagtaca
>TU79554
ggcaaaagtactcacttcccgtacttaagtagaagtacagatacttgtgttaaaaaatactctggtaaaagtagaagtactgatttaacttctttacttaagtaaaagtaacaaagtacaggctttgaaatgtacttaaagtataaaagtaaaagtagccttgcgaatgacaaccactttttatgcaaagctacctggaccacacacgttactagagtgcaagatgagaaacttcagtggacataaaaaccaggctctttatatgccattgtctacattttaaatggatgtctgccaaacatcacatatatgattattgtgacagagactgggactccagcttaataagattctgactgagcaagatatgaattcaattgtgattctgtgagaattcacagatccagtttctcttttttaatcgtccacttaacatttaaaggaatctacatgtatgtgtgtgtgctcaaatatagaaagaaaataaaggatacaatatgaattactaaacatagattaattaagaagttccccatacttttagagttacacagcacattggccaggagtcatacttgacgcctcctagcctatctcaaacatctctctcagataaggccagggatggttgggaatgtcttgctgcttgtctgcctaatctctgggatctctgttttcttcattttcaatcatgtcgccgtccatactactagtgctaacgttaccaccatcaagctgcaattatttgccgcaaatgaatgcagaatgcggccgaatctgtcgagtcgtcttgtagtggtgcgttacatgcaatgtagcctacagtatattcccatccaattagattgaattcggtattgatcacgtgaaaaataataacggtaactccagtgaaattatttgaaacttgctagtgaggactagattaggaccgtatttatagctgatgctggtttcaaacttcgcgCCCCCCCCCATGGGGGggctgtaaaacacggacagagacaacttctttcttttgatgctttacaagcaacgtgaaacctagctaacaggtgaagaacacaaacaactaaatcactagctaacctactttaactgtgcaggaactatagaccaatacaacaacaggcttaaatgaactgacaacataagttatacgacttacagttctcaaggacgcacacacaccatctcaactgattatcctccggacagcagtctctttttctcacatttttttctgcgtccgcgctattctccgacattacgacctcttgtacaaaactaaagtaacgagccaattttttaaatgtaaggagtagaaagtaccgatattcgtgttaaaatgtaaggagtaaaagtaaaaagtcgccacaaaaaaaaatagtaaagtaaagtagaaatatccgaaaaatctacttaagtacagtaacgaagtatttgtacttcgttacttcccatctctgcaaAATAGTTTGACCACTTGGGAGAGACCCTGAATTCATTGCCATCTTCTGATATTTACATATTTGTCCACTAGAAGGCGCACCTGCACACACCTGCAAAATGTCACCCAATCACGTTGAGGGAATTTGTACTTTGGTACAGCTGACccctagcctggatgccag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79552 False 910 lncRNA 0.41 1 4554542 4555451
TU79554 True 1634 lncRNA 0.39 1 4554021 4555654

Neighbor

gene id symbol gene type direction distance location
araf araf,LOC103397571 coding upstream 97777 4437533 ~ 4456244 (+)
npr3 npr3 coding upstream 165226 4357094 ~ 4388795 (+)
pdzd2 LOC102293871 coding upstream 210351 4271504 ~ 4343670 (+)
LOC120560812 thg1l,LOC106912903,LOC103154062 coding upstream 326989 4226036 ~ 4227032 (+)
si:dkey-3h3.3 NA coding upstream 345522 4199523 ~ 4208499 (+)
LOC120560544 ppp6c,LOC102784428,LOC105915786,LOC106585446,LOC103397055,LOC105014157,LOC101171716 coding downstream 140949 4696603 ~ 4703041 (+)
golga1 golga1 coding downstream 149063 4704717 ~ 4735322 (+)
rpl35 rpl35,LOC103397472 coding downstream 182286 4737940 ~ 4741131 (+)
chfr chfr coding downstream 835033 5390687 ~ 5416871 (+)
ankle2 ankle2 coding downstream 913652 5469306 ~ 5488700 (+)
G59175 NA non-coding upstream 91197 4461364 ~ 4462824 (+)
G59174 NA non-coding upstream 118761 4433093 ~ 4435260 (+)
G59163 NA non-coding upstream 204102 4349566 ~ 4349919 (+)
G59132 NA non-coding upstream 224561 4307919 ~ 4329460 (+)
G59093 NA non-coding upstream 420957 4132848 ~ 4133064 (+)
G59218 NA non-coding downstream 1351 4557005 ~ 4558065 (+)
G59240 NA non-coding downstream 67861 4623515 ~ 4624154 (+)
G59247 NA non-coding downstream 88978 4644632 ~ 4668855 (+)
LOC120560386 NA non-coding downstream 343204 4898858 ~ 5053215 (+)
G59296 NA non-coding downstream 346329 4901983 ~ 4902190 (+)
mrpl41 mrpl41 other upstream 22856 4530054 ~ 4531165 (+)
trnaq-uug_2 NA other upstream 121282 4432668 ~ 4432739 (+)
trnal-aag_1 NA other upstream 121768 4432171 ~ 4432253 (+)
G59172 sub1 other upstream 124040 4424141 ~ 4429981 (+)
G59086 NA other upstream 436390 4117279 ~ 4117631 (+)
LOC120560573 LOC104934257 other downstream 15729 4571383 ~ 4618033 (+)
fbrsl1 LOC103357558 other downstream 497579 5053233 ~ 5370868 (+)
golga3 golga3,LOC102797501 other downstream 892407 5448061 ~ 5469210 (+)
G59347 NA other downstream 939501 5495155 ~ 5497754 (+)
kat6a kat6a,LOC102311194,LOC106937639,LOC106932925 other downstream 2119210 6674864 ~ 6718884 (+)

Expression


Co-expression Network