G59287


Basic Information

Item Value
gene id G59287
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 4732630 ~ 4842143 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU79649
cacacacacacacacacacacataactatactatactatactataaggATTACTGGTATCAGCCTCTTAAATCAGTACCAGTTAGACCATATCTTGTAATGGTGATTTCAGTGACATAATGTATAGAAATATGaagaaaatgtcattttaaagaGAAATGAGTGCAAGGAAGTTTCATTTAAAGATGCATGCCCATTTCAAttttgatgatttaaaaatTCAACACAGTAAATCATGATCAATCATCAATCACAAATAGTAAAATGTCAGCGTTGTCTTTTCTTAAAGGGGTGCTACTGGACAGAAATCCTAGCCTGGATTCCCTTGGTTGTGCAAGGAGCTTTGTAAAGTGGTCTTAGACTAACTGCAATCCTTGGCCATCAGAACATAGAagacactagggctgcacaatatcttgtttgttttttatggtCATCGGCGCAAtttcaactggcgcaataaacgcATCGCAAAAGGCTGTGACgtatcgcgaaagacactttcagtagaaaactgcactttcaaATGTAACGGTCACTTTTTTTAGttgtgccttttatattcaattcaagtttcactttgttcaataaaagaatgttggaaatgatttttaTGTGAGGGAGTATGAGTTTTAAATTCCAAAAGcaatttgtttgtattttaccAGAACACTGAAAGCAGTACACTTAAATATGTTtctttatcgcaagtaatatcgttattgcaATATTCAACATTAGCGCATATTGCATAAtttcctcatatcatgcagccctagtagatacacattcattttaatgctATCGTGAATATTTCTACAGATAATGAAGAAAACTATTCCAGTAAAGAAAATGGctgatgacatttttatgagAATTTAGGAAGGGGACTCAAACTCCACATGTAGACAAATTTAGATCCTTTGACACAAATGTGAACTACTTATGTCCATTTGgcgcgttattatggatcccacgtaacttctaggcaagtcccgccctacgaagcagcttgactggttggggttaggcatttgacctcgagtggttaaatttgggatagccgattggtcaggggataggacttGAACTaatcgggttacgttaccttgcctAACCATGAaagcctggccaatagtagtgtgtgaatgctattgaagggcgggtgttgcctagaagttacgtgggCTCCATAATAACGCCCATTTGGCAGGTACTATTAAATAAACTCTCACCGATACTGAAACCAATCAGCTTGGTGAATCTGTACGGACCATTTAATGAATTTGAATGAAGAAGCCCTCCCTGTGATTGAAACCTAACGATTAACCAAGTGACAGAATCCTTCAGCAATCAATGCCGCACCATTTGTTCAGTGAAGACAGTCACATCAAGTCCCATGTAACTTGTGTTGTTTGAATCTGGGCAGAATTAAGGCAGCCCCTAAGACAACAGTCAAGTCAGTCTGGTATTTCATTCTGATGCTGGGTCTCATTTTCTGACATGCTTACTCACTTTTTGCTGTTTCCACTGAATAGAAAACATCAGATCTGCGTCATTTGTCAGGTAAGAAAAATGAGACTTGAGACACTTAAAACTCCAGTATTAATTATGTGTAATAGTTTACCCTCTATAATGGTCAAAAGTCCATCTGCTTCAACCACTGACAAGGaaataatgtcatttaaaaaatcaaCAACTGATTATGAACATACTGTGCAGCCCTGTCCGTCCCCACAGATCATTGAACTGTGGGAGGCTGTTCAAAGTTTAAAGCTGAGTCCTGCTCAGTGATAGAAGACACAGCGTACGGACTTTTTCCTCCTGGAGGCGGTCCTTTGATTCCTTTCTCTCCATCGCTATAGCTCTTTCTGCAGCTCATCAGCTCCAAAGAGTTGGATTGCCTGAGATTGAAGGCCGGATGGCACCCTTTGGAGAAGGCTTGGATCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79649 True 1949 lncRNA 0.39 2 4732630 4842143

Neighbor

gene id symbol gene type direction distance location
si:ch211-158d24.2 megf9,LOC102787576 coding downstream 37420 4644604 ~ 4695210 (-)
LOC120559971 NA coding downstream 89892 4639104 ~ 4642738 (-)
dph7 dph7 coding downstream 188744 4531968 ~ 4543886 (-)
pnpla7b pnpla7 coding downstream 202884 4477275 ~ 4529746 (-)
LOC120560167 NA coding downstream 261150 4461429 ~ 4471480 (-)
si:dkey-112e17.1 LOC103368838 coding upstream 579478 5421621 ~ 5445464 (-)
pgam5 pgam5 coding upstream 646613 5488756 ~ 5498896 (-)
ranbp1 ranbp1,LOC102791189 coding upstream 748431 5590574 ~ 5594904 (-)
dgcr8 dgcr8,LOC102791485 coding upstream 764888 5607031 ~ 5626385 (-)
tango2 tango2 coding upstream 801061 5643204 ~ 5667209 (-)
G59268 NA non-coding downstream 28357 4635908 ~ 4704273 (-)
G59241 NA non-coding downstream 107323 4625038 ~ 4625307 (-)
LOC120560046 LOC103358197 non-coding downstream 175017 4548725 ~ 4557613 (-)
G59207 NA non-coding downstream 271559 4454690 ~ 4461071 (-)
G59197 NA non-coding downstream 318649 4413759 ~ 4413981 (-)
G59312 NA non-coding upstream 107128 4949271 ~ 4949523 (-)
G59314 NA non-coding upstream 162823 5004966 ~ 5005663 (-)
G59373 golga3 non-coding upstream 593276 5435419 ~ 5453895 (-)
G59388 NA non-coding upstream 625192 5467335 ~ 5515364 (-)
LOC120560122 NA non-coding upstream 786973 5629116 ~ 5633186 (-)
LOC120560375 NA other downstream 296314 4432844 ~ 4436316 (-)
sub1b sub1 other downstream 302540 4424149 ~ 4430090 (-)
golph3a golph3,LOC103397487,LOC108249570 other downstream 508062 4209748 ~ 4224568 (-)
G58994 NA other downstream 1043292 3688629 ~ 3689338 (-)
G58920 LOC106099046,LOC107687292,LOC107712180,LOC107663003 other downstream 1315776 3415627 ~ 3416854 (-)
LOC120561493 NA other upstream 624080 5466223 ~ 5466437 (-)
LOC120561494 NA other upstream 747430 5589573 ~ 5591810 (-)
G59521 NA other upstream 1584063 6426206 ~ 6426811 (-)
G59563 NA other upstream 1680616 6522759 ~ 6523674 (-)
G59739 LOC102786375,LOC102210956 other upstream 2149060 6991203 ~ 6996856 (-)

Expression


Co-expression Network