G59299


Basic Information

Item Value
gene id G59299
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 4964896 ~ 5005815 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU79675
agtatgagggcgtgccctgacagtacctaggtaaggactactagccagtcagaagcagagtgtgagggcgtgccctgacagtacctaggtaaggactactagcaggtcagaagcagagtgtgagggcgtgccctgacagtacctaggtaaggactactagccagtcagaagcagagtatgagggcgtgccctgacagtacctagttaaggactactagccagtcagaagcagagtatgag
>TU79676
gcccatattatgctcattttcaggttcataactgtattttaaggttgtaccagaataggtttacatggtttaattttcaaaaaacaccatatttttgttgtactgcacattgctgcagctcctcttttcaccctgtgtgttgagctctctgttttagctgcagagtgagacatctcacttctgttccatctttgttgggagtcgcacatgctcagtagctaggtaaggactactagccagtcagaagcagagtatgagggcgtgccctgacagtacctaggtaaggactactagccagtcagaagcagag
>TU79677
gcccatattatgctcattttcaggttcataactgtattttaaggttgtaccagaataggtttacatggtttaattttcaaaaaacaccatatttttgttgtactgcacattgctgcagctcctcttttcaccctgtgtgttgagctctctgttttagctgcagagtgagacatctcacttctgttccatctttgttgggagtcgcacatgctcagtagctaggtaaggactactagccagtcagaagcagagtatgagggcgtgccctgacagtacctaggtaaggactactagccagtcagaagcagagtgtgagggcgtgccctgacagtacctaggtaaggactactagccagtcagaagcagagtatgagggcgtgccctgacagtacctagttaaggactactagccagtcagaagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79675 False 240 lncRNA 0.53 2 5005460 5005815
TU79676 False 310 lncRNA 0.44 3 4964896 5005173
TU79677 True 422 lncRNA 0.46 3 4964896 5005689

Neighbor

gene id symbol gene type direction distance location
rpl35 rpl35,LOC103397472 coding upstream 223765 4737940 ~ 4741131 (+)
golga1 golga1 coding upstream 229574 4704717 ~ 4735322 (+)
LOC120560544 ppp6c,LOC102784428,LOC105915786,LOC106585446,LOC103397055,LOC105014157,LOC101171716 coding upstream 261855 4696603 ~ 4703041 (+)
araf araf,LOC103397571 coding upstream 508652 4437533 ~ 4456244 (+)
npr3 npr3 coding upstream 576101 4357094 ~ 4388795 (+)
chfr chfr coding downstream 384872 5390687 ~ 5416871 (+)
ankle2 ankle2 coding downstream 463491 5469306 ~ 5488700 (+)
zdhhc8b zdhhc8 coding downstream 497914 5503729 ~ 5586377 (+)
trmt2a trmt2a coding downstream 589751 5595566 ~ 5607029 (+)
arvcfb arvcf coding downstream 662460 5668275 ~ 5962072 (+)
G59297 NA non-coding upstream 53607 4911070 ~ 4911289 (+)
G59296 NA non-coding upstream 62706 4901983 ~ 4902190 (+)
G59247 NA non-coding upstream 296041 4644632 ~ 4668855 (+)
G59240 NA non-coding upstream 340742 4623515 ~ 4624154 (+)
G59218 NA non-coding upstream 406831 4557005 ~ 4558065 (+)
G59336 NA non-coding downstream 375378 5381193 ~ 5381464 (+)
G59350 NA non-coding downstream 582775 5588590 ~ 5588900 (+)
G59353 NA non-coding downstream 584755 5590570 ~ 5594942 (+)
G59354 NA non-coding downstream 603516 5609331 ~ 5614090 (+)
G59433 NA non-coding downstream 957598 5963413 ~ 5963662 (+)
LOC120560573 LOC104934257 other upstream 346863 4571383 ~ 4618033 (+)
mrpl41 mrpl41 other upstream 433731 4530054 ~ 4531165 (+)
trnaq-uug_2 NA other upstream 532157 4432668 ~ 4432739 (+)
trnal-aag_1 NA other upstream 532643 4432171 ~ 4432253 (+)
G59172 sub1 other upstream 534915 4424141 ~ 4429981 (+)
fbrsl1 LOC103357558 other downstream 47418 5053233 ~ 5370868 (+)
golga3 golga3,LOC102797501 other downstream 442246 5448061 ~ 5469210 (+)
G59347 NA other downstream 489340 5495155 ~ 5497754 (+)
kat6a kat6a,LOC102311194,LOC106937639,LOC106932925 other downstream 1669049 6674864 ~ 6718884 (+)
add2 LOC102210956,LOC102786375 other downstream 1963304 6969119 ~ 6996856 (+)

Expression


Co-expression Network