G59388


Basic Information

Item Value
gene id G59388
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 5467335 ~ 5515364 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU79783
tttttttttgttttaCAGATGAATAGTGCAATTTTATGATAAATACAATCACATCTCCCAACACAGATGTTAAAACAGGAATGATTCAATTCCAacctttgaaaaataaaaagcagataCAGCCATACACGCATATGCATTGAGCGCTGGTGCCAAAGCAAATATTATTACATACCACCTAACGTTAAAGTGAaaggtagtttttttttcagaacacAGTATATCAATATATTTGTTATTTGCCTCAGTAAGCATTCTCCTCAAAATATTGTCCCTTTGGAAATTCATAATGATTACAATGGTGTGTGGGAATGAGCACCAACACAGCAACTGCAGCACAGTTACACAAGCTACTGAACCATCCAATAACCCCTTTACACTCAAACTTTAGTGCAGCTGTACCAGAATTACTATTGGCTTTGATTTATAGTATGCATTTGATATTTTGTATTTCATCGGTGTTACACTATTAAACAATTATGACTTTACAATCAtacaaaaaggaaatgtatttatatattaaccTCTGGAAACAATTAACTTATCCCAATACCCATGAAACAGCCATAAAACAAGTATAACATCTGATTCAGTGGTAGTCAATTTTAGTAAATACAATATGTACCAAATGTAACAGAAAATGAACACATCTGATTGCACCTGCTGTTAGAAGTAGTAAGATTTCTGCTTCATTGTAAAACTTTCCCTTTCAGTCAGTTAAGTTTTTAATCTAGTGTGCAATGTCAGTTGATGTGacccacttttttttcttttttacaataaCCCATTCTTCAGTAAGGatttgcacacacatacaatataacATATTACATCTTGCCCACACCCTCAGCAGAAATATGCTCATTCAAACGTAGTCCTTTACAGCATACTAAATATTGCTTAAGGCTTTTTTTGCGTACAAATTACTGCAGTCCATGCTAGACAAAACACCTCCATATATAACTGAGATTAATGTTTTTAACAGTAAGAACCCAAGGTGATATGGTTACAACAAATGTAAGAAACACTGCATTTTAACAAGAGGCAATACAAAAAAACTGACCACAATTGTGCATGACGTTTAACTTCATGAAAAGGAGTGACGATGTTTCATCATCAACTGCCTAGAAACCATGTGGATGTGTAACCGCGTCAGTTAAATCTTAGATGAGCTACTGCTCTCGTACACAGGCACAAAGAAATGGAAGAACAGCTCATAGCCAGTCTGGTGTCACCAAAAACACTTTTGGAATTAATGTCAGCCATCATACTGCAGCACTCAAAGCCAGTGATTTCATTATTACAAAGACAATGATGACTAAATCACTTTTAGAGAAAAAACCCGCCAACTTAACAGGGAAAAACTGATTAGTTAAACAGTCCGTACTAGATCATATTTGTATGACAACAAAACTAAGGATGGGGGATCCTCTAAGAGACGCTGTCAGATTTGTAATTCATtaactcaaaataaataaatgtgacaatagcataacaaaaatataaacagcTGTCAAATAAAGAGGAAAGAATAAAGCTATGGTATATAAAGTATTACTCTGCGAAAGCACTTCTGTGCTGATGGGAGAATGCCAAATGTTGGCAGCAATTgttaagaaaagagaaagggaaTTAGGGGCCGAAAAGTGCCTTTGTGGATAAAACTCCACTCTCCCTCTATTGGCCTGAGAAAAGTACTTCTGTTATGACTGCTGCTGTTCTGCTTCATTGTTATTTTCCACCACCATGTTTAGCGGCGCTGATGGTTTGGAGATGTTTTCAAGCTCCAGTTCAGCCAGTCCCTCCTCTGTGTTTGTCCATGAGCTCATTGACTCATGTACTGTTACTGTGTGCTCCTCCATCTGTCTTTGGAGGCTGTCCATCTCCTc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79783 True 1889 lncRNA 0.36 2 5467335 5515364

Neighbor

gene id symbol gene type direction distance location
si:dkey-112e17.1 LOC103368838 coding downstream 21871 5421621 ~ 5445464 (-)
galnt9 galnt9 coding downstream 600360 4760116 ~ 4866975 (-)
si:ch211-158d24.2 megf9,LOC102787576 coding downstream 772125 4644604 ~ 4695210 (-)
LOC120559971 NA coding downstream 824597 4639104 ~ 4642738 (-)
dph7 dph7 coding downstream 923449 4531968 ~ 4543886 (-)
ranbp1 ranbp1,LOC102791189 coding upstream 75210 5590574 ~ 5594904 (-)
dgcr8 dgcr8,LOC102791485 coding upstream 91667 5607031 ~ 5626385 (-)
tango2 tango2 coding upstream 127840 5643204 ~ 5667209 (-)
tbx1 tbx1 coding upstream 533599 6048963 ~ 6061862 (-)
hk2 LOC103369118,LOC106531304 coding upstream 1379838 6895202 ~ 6941736 (-)
G59373 golga3 non-coding downstream 13440 5435419 ~ 5453895 (-)
G59314 NA non-coding downstream 461672 5004966 ~ 5005663 (-)
G59312 NA non-coding downstream 517812 4949271 ~ 4949523 (-)
G59287 NA non-coding downstream 625192 4732630 ~ 4842143 (-)
G59290 NA non-coding downstream 726204 4738049 ~ 4741131 (-)
LOC120560122 NA non-coding upstream 113752 5629116 ~ 5633186 (-)
G59437 NA non-coding upstream 115386 5630750 ~ 5631797 (-)
G59440 NA non-coding upstream 126951 5642315 ~ 5642551 (-)
G59441 NA non-coding upstream 127252 5642616 ~ 5642842 (-)
G59457 NA non-coding upstream 443544 5958908 ~ 5961150 (-)
LOC120561493 NA other downstream 898 5466223 ~ 5466437 (-)
LOC120560375 NA other downstream 1031019 4432844 ~ 4436316 (-)
sub1b sub1 other downstream 1037245 4424149 ~ 4430090 (-)
golph3a golph3,LOC103397487,LOC108249570 other downstream 1242767 4209748 ~ 4224568 (-)
G58994 NA other downstream 1777997 3688629 ~ 3689338 (-)
LOC120561494 NA other upstream 74209 5589573 ~ 5591810 (-)
G59521 NA other upstream 910842 6426206 ~ 6426811 (-)
G59563 NA other upstream 1007395 6522759 ~ 6523674 (-)
G59739 LOC102786375,LOC102210956 other upstream 1475839 6991203 ~ 6996856 (-)
G59881 NA other upstream 2068722 7584086 ~ 7584519 (-)

Expression


Co-expression Network