G59457


Basic Information

Item Value
gene id G59457
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 5958908 ~ 5961150 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU79892
ttTATTGATTTTTACCACAACATACATCTTTGTAAACACTGTGTAAAATATGCAAGCTTTATAAAGTCACATACgccacaaagaaaaaaacaaatcggACTTCGATGCAGGCACATGCCATTCGCCTTGATGACGCACAAGTGATACCGACTCGGATTGGATTCTCTTTCTGCCTCCCTGACCGACTGGGGCTGGAAAAAGGAGACCGGACCCATTCTCACTGGGTTGAGTGTGCAGTCTCACCGAGCAAGAGAAAGTAGTAATATGATTCTGTATCTCTTATCTGCTTTTCTTTATCTCAACTGCCCCCCACCCCCTAAAGCGTTGTAAAAATATATACTATATGACCAAACATGAtgtttttagttttgtacaGTGTGATGCAATTCTATTATTTTGGCCTTGTACATCCACATCCACTCGTCCTCCCTGTACTCTCACCTTGCACATGAATGAATTAGTTACTATCCAAATGACACCACAAAAACTGGCACTTGGAAAGAATAGAATATAAACATCTGTACAGTTTTTCTTCATGCTCACTGACTGAATATTTCTCTTTAAAAACGCACCACCGGAGAAGGAGGGATCAGGGTTTTGGCGGTAACTCGGGTTCTGAATGCAtcgagaagaagaaaaacgaaGGAACTCTTCTTATTAAACACTAGTGTCTGGTTTCGGAGATGCAGGGGCCGTCCCACACCGTGTAGGTACTTCATCGCCTTTAGAAAGAACACTGCAGATAAACTTTGTTTCTggaacttttttgttgttgttgttgctgtgacaaatacaaaatataaataggTGATCGCCGCGTAACTCGACAACGTCCGACACACATTTAAGTTACATGGTTATTTCGTGTTTACAAACGTGGTGATCCTTTATCAAATGAAATGTGCTTTCCAAACAATGTGATATTAATATACAACTAAGTCGGtcatttttatgtatgtttttctacttcattttaccattttctttttcctttttgaccccaatatacatttatataaccccccaaaaaaaatgcttttagaTCTATCCCTTCAACAAGAGAACAATCTTACACctctcttttaaaaaaacaaacacatcatTTATAAACAAAATGCCGTAAATCCTCTTTAATACACATCACTGACGAAGAGCAATCAGCCAGGAAACTCGCCAAACTGCGTCGCTTACACAACCTAAGTGGTTACCCTAGTAACCACAGCTCTGTGAGTGAGGGTCAACACGTTGACCACGATGAAACGGCTGTTTCCGTTTCAGCTTGCTTTTGCGATGCGGCGTGAACACAGAGCGTTACTCCGTCCGATGTACACACTATGTCACTTTCCCTTCTCCAGACCACAACGTGCAGACCCCTCACTTTAGTCTCAATTCCTTGTTCACCACTTTTGATTTCAAAGCATCTCAGtgcattttttctctctctcgaaATAAAACACAGTGAACCAAATATACGTCTATGAGAGCAGACTGCTGAGTGTCCATGTTTACCCACAATGCTACAGCTCCTCCTGGGCTcgctttctctccttctctctttttacTTTCTTGTGTCCATCCCACCAATCTGAAAACAAACGTTCCGTGACCCTCTTAACACACCGGTCCATACCTGTTTCACATCAAAATACCAAAGCTCGACAACAAACTGTAAGTCAAATTctcaaaaaaaaaccaaaaaaacacaaagttcaGGCATGAACTTCTTCCAGATGTGAAAACGGAAATGAAAAACAttcattttgcatctcttttcccACAGCTTTCCTTCCAACACGTTCCTTTCTTCTATTACCTTCCTTCCCCTCGCATCTGATCGCCCTCCATACGTCCTCCATTCCTTCACCAGCACCGGCCTCGGTCCGCTTCGGGGAACCGGTAGAGCTCAACAAGAGTCAACACTGTAAAAATTCACATGATGTCCAGTGGGAATGTAGTTATGAAAAAGTAGCaggagtagttttttttttcttcctttttttttgttcttcttctgAAAAGCATGAGAATGTTGGCTGCTGCTGGGTAGTTGCTGCCGtgatctttatttttatttatttttaaaatcctCTTTTCTGTACAAAGTCCAACTCCAAAGATGAGCTCCGTATGAAATGGCAGTGGTGATATGAGAGGTCGTCCTCTAGCTGGGATGGTGTTACTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79892 True 2183 lncRNA 0.41 2 5958908 5961150

Neighbor

gene id symbol gene type direction distance location
tango2 tango2 coding downstream 291699 5643204 ~ 5667209 (-)
dgcr8 dgcr8,LOC102791485 coding downstream 332523 5607031 ~ 5626385 (-)
ranbp1 ranbp1,LOC102791189 coding downstream 364004 5590574 ~ 5594904 (-)
pgam5 pgam5 coding downstream 460012 5488756 ~ 5498896 (-)
si:dkey-112e17.1 LOC103368838 coding downstream 513444 5421621 ~ 5445464 (-)
tbx1 tbx1 coding upstream 87813 6048963 ~ 6061862 (-)
hk2 LOC103369118,LOC106531304 coding upstream 934052 6895202 ~ 6941736 (-)
ch25hl3 NA coding upstream 1200151 7161301 ~ 7169700 (-)
erlin2 LOC100709255,LOC101468631,LOC102303107,LOC102789125,LOC102208735 coding upstream 1221663 7182813 ~ 7212011 (-)
LOC120561006 NA coding upstream 1259691 7220841 ~ 7223583 (-)
G59441 NA non-coding downstream 316066 5642616 ~ 5642842 (-)
G59440 NA non-coding downstream 316357 5642315 ~ 5642551 (-)
LOC120560122 NA non-coding downstream 325722 5629116 ~ 5633186 (-)
G59437 NA non-coding downstream 327111 5630750 ~ 5631797 (-)
G59388 NA non-coding downstream 443544 5467335 ~ 5515364 (-)
G59501 NA non-coding upstream 216601 6177751 ~ 6177970 (-)
G59505 NA non-coding upstream 259435 6220585 ~ 6220850 (-)
G59507 NA non-coding upstream 287483 6248633 ~ 6248878 (-)
G59508 NA non-coding upstream 291055 6252205 ~ 6252412 (-)
G59519 NA non-coding upstream 449235 6410385 ~ 6411300 (-)
LOC120561494 NA other downstream 367098 5589573 ~ 5591810 (-)
LOC120561493 NA other downstream 492471 5466223 ~ 5466437 (-)
LOC120560375 NA other downstream 1522592 4432844 ~ 4436316 (-)
sub1b sub1 other downstream 1528818 4424149 ~ 4430090 (-)
golph3a golph3,LOC103397487,LOC108249570 other downstream 1734340 4209748 ~ 4224568 (-)
G59521 NA other upstream 465056 6426206 ~ 6426811 (-)
G59563 NA other upstream 561609 6522759 ~ 6523674 (-)
G59739 LOC102786375,LOC102210956 other upstream 1030053 6991203 ~ 6996856 (-)
G59881 NA other upstream 1622936 7584086 ~ 7584519 (-)
specc1la specc1l other upstream 1766410 7727560 ~ 7766012 (-)

Expression


Co-expression Network