G59687


Basic Information

Item Value
gene id G59687
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 7027298 ~ 7029309 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU80156
gggggcgaGTCACCCTGAAACAAAAACCACTGGCTTTGACTTTTTCAGTAAGGAACACACGGAGAAATGGCTGAATGGTTTCCTCTGTGTTCACATGGAAAgctctaaaatgtaaaaaaaatgaaaaaaacacagatttttCTCTCCTTTGCCTTGCCTTTATAGCTATTTATTGTTCCTGCAAAAATGTTAATGTAAATAGTTTACAGAAAGATCTCTATGTCTAtcaacaaatgtatttattagatATGCTGAATATATAGAAGAAACTATAGAAATCTATTTAATTAGTCCTAGCCGATGTTCTTCTTGTGAGGTTTATTGAGAGTTTACAGTGTGTAGTTTGTTTGCACAGCCTAGTCCAATCCATAGTTATTTAGAAAGGTCTCCGGTGCCTCGAGGCTTTTTGTGTCTGTTCAGAAttcggcacaaaaaaaaaaaaatgttttctatgTGGTTGGtcatactttttatttttttctttcaaagccATCTTGCCCCTTTAACGCAGGAataaaaggaaggaaaaaaaatcggaataatttattttgggaaaaaaaaaaaaagaagagaattttaaaaagtataaaagtgaGAGGAGTTGGTGGCCAGGGTTGAAGGTGGGGATGGTTTCTGCGGCGCTGCCGCGTTGCCCTGTTGGTCCATCTCCGTGCCTacgaactgcaaaaaaaaaaaaacgcaaacAAAATGGCCGCTCTTTGTTTTTTGGGTTCAGAAATCATCACAGGCAGGGAGAGGATtgcaagctttttttttttaatttttttaatgtagaCGACATCCTGAAGCCTGCGGCGTAGCAACGCCGTGCCAAAGGAACGTCCCTTGCTCTTGCATCCACCATTTGGAAATCTCAGCTAAAGCGTAAAGGCAAATCggaaggacattttttttttttttttttttgaaatgcttAGTGTTTTGAGTGTGGAAtgctgctcttttttttcttgtcaaatTGAAACCTTTTCAAATGGAGAGGAACTGTGTAGCCACGTTATTAGGGGGACTAAAGGGGAATTGTAATGAAAATTAGGTGTGTGTGGGCATTTGTATCCAGtatgggaatgtgtgtgtgtgtgtgtatttcgtcACGGTCTTCAGAGAGACATTTTCAGGGTGTAGTGGAAGAGGGTGGGTGGTTTAAATTGAAATTGTAATTTGTTCAAAACAAAAGTCCACTTGATGTATTAACCTAAGCATTAACGTCTGTCTACGGGAGTCTCCTGTTTCCGCCTTTTTTTCCAATCCACGGCCTGTTGTCTGTCTTCCGCcaatgtgtgtgcacgtgtgtccCTCCACATGCTGCGTTGGCATCCATGGTGCAGGTGaggcaggtgtgtgtggtgaggcaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcaacgATCACATGCAACTATTGCTCCTCACCTCGCCCTTTCCtcatctcttaaaaaaaaaactaataaagacCCTGGTGCTCTCAGCATCTGCCTTAAGAAGCAGCTGTGGAATCTCTCAAAGAACAAGACTACTAGTCAGACCAGTTGTTTAAGCTACAGGTTTCGCCATCAGGGGAAACTCATGTTCATGTGTATATTTGATTTAGTTCTCTTTTCCCATATACAAAGTGTCTGATAATGCCTTAAAAGAGACACGACCTAACAGAAGTATATGTATGAGTGtatatgagatatatatatcGACATGTATCACAAGGGTCATTCCTTTTCATTGTGACGGTCTCAGGCGTGGTGCTTTCATGCattacacaacacaaacacacacacacacacacacacacacacaccacgtcATGGCTCCATGAACATCCCCATCGCCTGGCCGCCTGTCTGTTTATTGAACAATAACTTAAAGGATGGGATTTTGTGCACTTAACTTTTTAAGAAATGGATCATT
>TU80157
gggggcgaGTCACCCTGAAACAAAAACCACTGGCTTTGACTTTTTCAGTAAGGAACACACGGAGAAATGGCTGAATGGTTTCCTCTGTGTTCACATGGAAAgctctaaaatgtaaaaaaaatgaaaaaaacacagatttttCTCTCCTTTGCCTTGCCTTTATAGCTATTTATTGTTCCTGCAAAAATGTTAATGTAAATAGTTTACAGAAAGATCTCTATGTCTAtcaacaaatgtatttattagatATGCTGAATATATAGAAGAAACTATAGAAATCTATTTAATTAGTCCTAGCCGATGTTCTTCTTGTGAGGTTTATTGAGAGTTTACAGTGTGTAGTTTGTTTGCACAGCCTAGTCCAATCCATAGTTATTTAGAAAGGTCTCCGGTGCCTCGAGGCTTTTTGTGTCTGTTCAGAAttcggcacaaaaaaaaaaaaatgttttctatgTGGTTGGtcatactttttatttttttctttcaaagccATCTTGCCCCTTTAACGCAGGAataaaaggaaggaaaaaaaatcggaataatttattttgggaaaaaaaaaaaaagaagagaattttaaaaagtataaaagtgaGAGGAGTTGGTGGCCAGGGTTGAAGGTGGGGATGGTTTCTGCGGCGCTGCCGCGTTGCCCTGTTGGTCCATCTCCGTGCCTacgaactgcaaaaaaaaaaaaacgcaaacAAAATGGCCGCTCTTTGTTTTTTGGGTTCAGAAATCATCACAGGCAGGGAGAGGATtgcaagctttttttttttaatttttttaatgtagaCGACATCCTGAAGCCTGCGGCGTAGCAACGCCGTGCCAAAGGAACGTCCCTTGCTCTTGCATCCACCATTTGGAAATCTCAGCTAAAGCGTAAAGGCAAATCggaaggacattttttttttttttttttttgaaatgcttAGTGTTTTGAGTGTGGAAtgctgctcttttttttcttgtcaaatTGAAACCTTTTCAAATGGAGAGGAACTGTGTAGCCACGTTATTAGGGGGACTAAAGGGGAATTGTAATGAAAATTAGGTGTGTGTGGGCATTTGTATCCAGtatgggaatgtgtgtgtgtgtgtgtatttcgtcACGGTCTTCAGAGAGACATTTTCAGGGTGTAGTGGAAGAGGGTGGGTGGTTTAAATTGAAATTGTAATTTGTTCAAAACAAAAGTCCACTTGATGTATTAACCTAAGCATTAACGTCTGTCTACGGGAGTCTCCTGTTTCCGCCTTTTTTTCCAATCCACGGCCTGTTGTCTGTCTTCCGCcaatgtgtgtgcacgtgtgtccCTCCACATGCTGCGTTGGCATCCATGGTGCAGGTGaggcaggtgtgtgtggtgaggcaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcaacgATCACATGCAACTATTGCTCCTCACCTCGCCCTTTCCtcatctcttaaaaaaaaaactaataaagacCCTGGTGCTCTCAGCATCTGCCTTAAGAAGCAGCTGTGGAATCTCTCAAAGAACAAGACTACTAGTCAGACCAGTTGTTTAAGCTACAGGTTTCGCCATCAGGGGAAACTCATGTTCATGTGTATATTTGATTTAGTTCTCTTTTCCCATATACAAAGTGTCTGATAATGCCTTAAAAGAGACACGACCTAACAGAAGTATATGTATGAGTGtatatgagatatatatatcGACATGTATCACAAGGGTCATTCCTTTTCATTGTGACGGTCTCAGGCGTGGTGCTTTCATGCattacacaacacaaacacacacacacacacacacacacacacaccacgtcATGGCTCCATGAACATCCCCATCGCCTGGCCGCCTGTCTGTTTATTGAACAATAACTTAAAGGATGGGATTTTGTGCACTTAACTTTTTAAGAAATGGATCATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU80156 True 1927 lncRNA 0.40 2 7027298 7029309
TU80157 False 1925 lncRNA 0.40 2 7027298 7029309

Neighbor

gene id symbol gene type direction distance location
mxd1 mxd1,LOC106535940,LOC102787379 coding upstream 411 7008164 ~ 7026887 (+)
snrnp27 snrnp27,LOC102787093 coding upstream 20039 6997153 ~ 7007259 (+)
figla figla coding upstream 59202 6951936 ~ 6968096 (+)
npffr1l2 LOC104924995 coding upstream 172894 6829697 ~ 6854404 (+)
tet3 LOC104925995,LOC103369109 coding upstream 230601 6752288 ~ 6796697 (+)
cds2 LOC104924982,LOC103361071,LOC106535345,LOC107098564,LOC105938002 coding downstream 46017 7075326 ~ 7101894 (+)
arhgap25 arhgap25 coding downstream 79504 7108813 ~ 7136851 (+)
bmp10 bmp10,LOC101468345 coding downstream 110888 7140197 ~ 7143020 (+)
rchy1 rchy1 coding downstream 482730 7512039 ~ 7519772 (+)
LOC120560565 LOC103361063,LOC101470473,LOC101159109,LOC100710325,LOC108235010,LOC107393511 coding downstream 521305 7550614 ~ 7572968 (+)
G59627 NA non-coding upstream 211792 6815248 ~ 6815506 (+)
G59543 NA non-coding upstream 286009 6741041 ~ 6741289 (+)
G59544 NA non-coding upstream 286370 6740664 ~ 6740928 (+)
G59516 NA non-coding upstream 692507 6334494 ~ 6334791 (+)
G59515 NA non-coding upstream 693084 6333979 ~ 6334214 (+)
G59694 NA non-coding downstream 52705 7082014 ~ 7106854 (+)
G59696 NA non-coding downstream 150184 7179493 ~ 7263343 (+)
G59803 NA non-coding downstream 464579 7493888 ~ 7494204 (+)
G59804 tia1,LOC104967008 non-coding downstream 469180 7498489 ~ 7504014 (+)
G59833 NA non-coding downstream 558486 7587795 ~ 7588630 (+)
add2 LOC102210956,LOC102786375 other upstream 30442 6969119 ~ 6996856 (+)
kat6a kat6a,LOC102311194,LOC106937639,LOC106932925 other upstream 308414 6674864 ~ 6718884 (+)
G59347 NA other upstream 1529544 5495155 ~ 5497754 (+)
golga3 golga3,LOC102797501 other upstream 1558088 5448061 ~ 5469210 (+)
fbrsl1 LOC103357558 other upstream 1656430 5053233 ~ 5370868 (+)
LOC120560567 ier3ip1,yee9,LOC103361062,LOC100710589,LOC107393509,LOC105014506,LOC103152384 other downstream 545416 7574725 ~ 7576136 (+)
susd1 susd1 other downstream 570783 7600092 ~ 7623715 (+)
zbtb26 LOC104940087,LOC100710858,LOC102306976,LOC102206222,LOC101473380,LOC102792103 other downstream 596427 7625736 ~ 7630180 (+)
atp2a2a atp2a2,LOC102794349,LOC101476777,LOC102310403 other downstream 818362 7847671 ~ 7878371 (+)
cux2b cux2,LOC102795992 other downstream 917943 7947252 ~ 8051340 (+)

Expression


Co-expression Network