G59694


Basic Information

Item Value
gene id G59694
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 7082014 ~ 7106854 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU80168
ggttattcattttataacttttataagtcttacctactgcacctttaaccctAAAGTGTTTGACATGTTCAGTAATGTACATCTTACAAATACACTGTCCAGTCTGTAAATTGGTAAACCCCAAACTGCAGTTAGCAATGCTccatacaacaataaaaatagaagttttttttattatgaaggcCAGTGCGATGGATAGCAGCACTCTTCTCAGCATATTGGGCCCAACTGTCCCCTCACCTGGTTGCTATTTCATGGCAGAAGCAGAATGGCCCACAGagatggttttatttttatttctttggttTAATGGACTCATTctgttttttaatacatttttaatctcCAATAAAGGAGCTGTTCTAGGTTTTTACACATGTTCAGTAGAGTGGTGGGGATTGTTGCTTCATGGCTTCTGTTTGTGACATTGTTGGGATGGGACCGTACACAAAAGGCAACAATGTGTGTGCTGCCAATATCCGCTTCTGTGTGTTGTAGCCTCGCCATGTCCACTTCTTCAGAGCAGAAAGCCAGaatctatatatgtgtgtgtgcgtgcgtgcgtctatCACTGGTTGTGTGACCGCCAGCATATGTGCCAGTTGGGATCTCTTGCATCTGATGCTCAGGTTGTTTGCCAATACAGTCAGCTGCTGTGTACACCGCAGTCTGTGCCCAAGGTGTTTTACAGCAGGATTCTGTAATATTTCTACCACTGGCAACTGTTTGCTTCATTTAGTAGTAACGTATAAAAGTTTCTCCAGTGTTGAGTTcacttctgttttttgttttttgtttttttctgtctgtagtTGTTTTCGCAACTgctaaagcagtggttcccaacctggggtccgggcacccctcaggggggcggcaaagatcacagggggtgcgcaagtcttgatctggtttgaggttgatttaaaaaaaaaataaaagggccactcttcttttttttttcttcttttttttaacacatgaAGATGAGTTTACTTGTTACGTATAATATCTTCGGTGGCGGAGGCAGCTTTAAGTCTGAGAAAATCGAGCCTGTGTTACGAAAAACCTTGACTTTTAACAGTCAGGGAGGATCTAAAAAACGATGAAAATGTGGGATCAAGTGTTCTACCCATACTAGGGACTAGTAGTCATGATACCTCGGCCTCTGATTCATCAATATTGACGATTTTGTCTTTTTAATCTGCCCCCAGCAACGTTGGGGGACTTCACGGAGACACTAACTTGCCGAAGTACTCCTTTTAAAACTGCCAACACAATCAGCTCTGTTAATTTGTATAGTTATGTACGTTTTTatattgacttttttattttattttaatagaaGTCTGACCAAGACATTGACTCGCGCGGAGGGCTCTGAGAAAGGTCTGCGGGGTTACtccgtcgattcgacgcagaagcgTAAAACGGCCTTTAGCAAACGTAACGGTGTGTTCAGTGTATTTGGGGCCAACTCTGGTTAGGGCAAAGATTAGGCTCTAATCAGCCTGCCATGCTCATTAACCAATCGCCTCAGGCTGTCCGTCGTGTTTATGCACACTCCTCATTTCCTTTCTCGGAAGGCAAGAATTGATTGATGCCTCATCAGCGCAAGCCAAACCAACTCTGGAGGTTTAATGAAAGCGCTCTAGGTGTTCACGTGACCCAGGCAGAGCTTTTTTGTGCTCATTGTTAAAGGACAAAACAGCAATATGAACAATCATACAGTAGTCAGTGTAGCAGGGATGTGAAGATCAGTATCCAGGTGTCGGCTTATGAATCATCTTTGTACAGTAAATGGGCGCTTcatacggaagaggattagggccacgtgtgaaaaatgtatttggctgtgtctcaaaccgcacacttctgtcagtatactgctaatgtgcactgaccaattactgccgtagtgcccactttggaTGGTTAGTGTTGTCCCAAACGGAACACTTAACGTTGAAACGCTTagcggaaatgacgagcggtcgGCTCGCCCCGCCGCCTctgaaaatctgacgaaaatctcttaaactgaccttttgtcgatctgaaatgaagacagattcagcaacggcacggcctatttctcgcttaaaatgttttcagaaacacgtttcggtgaactatttttgtaaaattcgagatcgtattctgaacgagccgccattatgatctggctttgaaattcgggagatgccagacccatgtgacgcgttcgtccaatcagctgccggtcgacgtccctggtccctcccATTTCCGCTGCgtagtcaagatggcgcccaTTTAGTGCGCGTagtgtccatcgttccacactgaactttttgaccgtttttagggggtcatccggggactttttgcgttatctccactatatacttaaaactaagtgcttgaagtgtgcaagtagacagtttgagacacagcctttGAGTTCTGAGTTCAAAAAGTCTGAatcctgacatttttttttctcctgactTTAAACTCGGATCTCAAATACGCGTTTCCACACGTGGCCCTAATTAAGCTTTACTTCATTTTGGTCATTTTAGAAACAGTTTGTCCTTTATCAGATTCTGTTCtcaaaaatctatatatttttaagcAAAAGTCTTTTTTGTAACCCAAAATTAGTTATCAGATggaattaacttttttttttttcttctaaccCTATTTGAATGTCACTCTATTCCTATTTTCGTCGAAGCCATTTAAATGTCTCTGGTTTGAGTTTAAGTCTTACGCTTAACTtcttaaagtatttattttattttactgtaagaAAACCTTTTCAAAGTCACTATATTGTACATTAAAGAAGATGTTTAGGGTTGAGTGTTTTTCAGTACTTTTTGGTTAGGGGAATATTTAAAGTATTATTGTTGCCATATTGGAGAGAGGACGGCGATGGCAGATGCGTGTCTTTTCTTTCGGTCTTTTCTTGCTGTGACTTCAGTGCAGTTGGGTGTTTTCTAGGCTTTTCCCTGGTAGCTGTCGTGTGCCATCTCCCGTGTTGCAGTGCAAGTGGAAGACTGGTGTCCAGAATTCGTAGATCTCTCCTATTTCTCCGGCTTCACTGCCTGCTGTACGGTAACCTGgtgtgttttgatgttttttggaGCTTTTAGCCCTGCAGCTCTGTACTGCCGTTCCTCTGTCTGGGTGTTAACAGTCGGCCACTAGAGAGAGCCGGAGCTCCTGTGGTCGGTTGATCGAGTGTAACACTGATTGCTGCGTCTGAGCAGTAAGGTTTGACCCTTTTTGTTTCTGCTGTTTGATACATTCCAGCAGGGCCGGGTATGGCCACTGACTTCCTAAATCGATTCCATTCCGATTCAAAAGGTCCCGATTTGATTTCCCCATTTGATTCAAATATGAATCTACCCCTCACAATAACAATTTTGCTTTGCTATGAAAGAGGTTTTCTGAGAACTAATTCTGTACAGTGTCCAAGGAATCCtctaacctggtgcattattaGAAAGATGACTGTTGTCATTAAGATTTGACCCCAAAGCCAGTTACATAGAGACAGAAACAaa
>TU80169
gttttttttttttttttgtTGTTTTCGCAACTgctaaagcagtggttcccaacctggggtccgggcacccctcaggggggcggcaaagatcacagggggtgcgcaagtcttgatctggtttgaggttgatttaaaaaaaaaataaaagggccactcttcttttttttttcttcttttttttaacacatgaAGATGAGTTTACTTGTTACGTATAATATCTTCGGTGGCGGAGGCAGCTTTAAGTCTGAGAAAATCGAGCCTGTGTTACGAAAAACCTTGACTTTTAACAGTCAGGGAGGATCTAAAAAACGATGAAAATGTGGGATCAAGTGTTCTACCCATACTAGGGACTAGTAGTCATGATACCTCGGCCTCTGATTCATCAATATTGACGATTTTGTCTTTTTAATCTGCCCCCAGCAACGTTGGGGGACTTCACGGAGACACTAACTTGCCGAAGTACTCCTTTTAAAACTGCCAACACAATCAGCTCTGTTAATTTGTATAGTTATGTACGTTTTTatattgacttttttattttattttaatagaaGTCTGACCAAGACATTGACTCGCGCGGAGGGCTCTGAGAAAGGTCTGCGGGGTTACtccgtcgattcgacgcagaagcgTAAAACGGCCTTTAGCAAACGTAACGGTGTGTTCAGTGTATTTGGGGCCAACTCTGGTTAGGGCAAAGATTAGGCTCTAATCAGCCTGCCATGCTCATTAACCAATCGCCTCAGGCTGTCCGTCGTGTTTATGCACACTCCTCATTTCCTTTCTCGGAAGGCAAGAATTGATTGATGCCTCATCAGCGCAAGCCAAACCAACTCTGGAGGTTTAATGAAAGCGCTCTAGGTGTTCACGTGACCCAGGCAGAGCTTTTTTGTGCTCATTGTTAAAGGACAAAACAGCAATATGAACAATCATACAGTAGTCAGTGTAGCAGGGATGTGAAGATCAGTATCCAGGTGTCGGCTTATGAATCATCTTTGTACAGTAAATGGGCGCTTcatacggaagaggattagggccacgtgtgaaaaatgtatttggctgtgtctcaaaccgcacacttctgtcagtatactgctaatgtgcactgaccaattactgccgtagtgcccactttggaTGGTTAGTGTTGTCCCAAACGGAACACTTAACGTTGAAACGCTTagcggaaatgacgagcggtcgGCTCGCCCCGCCGCCTctgaaaatctgacgaaaatctcttaaactgaccttttgtcgatctgaaatgaagacagattcagcaacggcacggcctatttctcgcttaaaatgttttcagaaacacgtttcggtgaactatttttgtaaaattcgagatcgtattctgaacgagccgccattatgatctggctttgaaattcgggagatgccagacccatgtgacgcgttcgtccaatcagctgccggtcgacgtccctggtccctcccATTTCCGCTGCgtagtcaagatggcgcccaTTTAGTGCGCGTagtgtccatcgttccacactgaactttttgaccgtttttagggggtcatccggggactttttgcgttatctccactatatacttaaaactaagtgcttgaagtgtgcaagtagacagtttgagacacagcctttGAGTTCTGAGTTCAAAAAGTCTGAatcctgacatttttttttctcctgactTTAAACTCGGATCTCAAATACGCGTTTCCACACGTGGCCCTAATTAAGCTTTACTTCATTTTGGTCATTTTAGAAACAGTTTGTCCTTTATCAGATTCTGTTCtcaaaaatctatatatttttaagcAAAAGTCTTTTTTGTAACCCAAAATTAGTTATCAGATggaattaacttttttttttttcttctaaccCTATTTGAATGTCACTCTATTCCTATTTTCGTCGAAGCCATTTAAATGTCTCTGGTTTGAGTTTAAGTCTTACGCTTAACTtcttaaagtatttattttattttactgtaagaAAACCTTTTCAAAGTCACTATATTGTACATTAAAGAAGATGTTTAGGGTTGAGTGTTTTTCAGTACTTTTTGGTTAGGGGAATATTTAAAGTATTATTGTTGCCATATTGGAGAGAGGACGGCGATGGCAGATGCGTGTCTTTTCTTTCGGTCTTTTCTTGCTGTGACTTCAGTGCAGTTGGGTGTTTTCTAGGCTTTTCCCTGGTAGCTGTCGTGTGCCATCTCCCGTGTTGCAGTGCAAGTGGAAGACTGGTGTCCAGAATTCGTAGATCTCTCCTATTTCTCCGGCTTCACTGCCTGCTGTACGGTAACCTGgtgtgttttgatgttttttggaGCTTTTAGCCCTGCAGCTCTGTACTGCCGTTCCTCTGTCTGGGTGTTAACAGTCGGCCACTAGAGAGAGCCGGAGCTCCTGTGGTCGGTTGATCGAGTGTAACACTGATTGCTGCGTCTGAGCAGTAAGGTTTGACCCTTTTTGTTTCTGCTGTTTGATACATTCCAGCAGGGCCGGGTATGGCCACTGACTTCCTAAATCGATTCCATTCCGATTCAAAAGGTCCCGATTTGATTTCCCCATTTGATTCAAATATGAATCTACCCCTCACAATAACAATTTTGCTTTGCTATGAAAGAGGTTTTCTGAGAACTAATTCTGTACAGTGTCCAAGGAATCCtctaacctggtgcattattaGAAAGATGACTGTTGTCATTAAGATTTGACCCCAAAGCCAGTTACATAGAGACAGAAACAaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU80168 True 3557 lncRNA 0.42 2 7096777 7106854
TU80169 False 2763 lncRNA 0.43 2 7082014 7106854

Neighbor

gene id symbol gene type direction distance location
mxd1 mxd1,LOC106535940,LOC102787379 coding upstream 55127 7008164 ~ 7026887 (+)
snrnp27 snrnp27,LOC102787093 coding upstream 74755 6997153 ~ 7007259 (+)
figla figla coding upstream 113918 6951936 ~ 6968096 (+)
npffr1l2 LOC104924995 coding upstream 227610 6829697 ~ 6854404 (+)
tet3 LOC104925995,LOC103369109 coding upstream 285317 6752288 ~ 6796697 (+)
arhgap25 arhgap25 coding downstream 1959 7108813 ~ 7136851 (+)
bmp10 bmp10,LOC101468345 coding downstream 33343 7140197 ~ 7143020 (+)
rchy1 rchy1 coding downstream 405185 7512039 ~ 7519772 (+)
LOC120560565 LOC103361063,LOC101470473,LOC101159109,LOC100710325,LOC108235010,LOC107393511 coding downstream 443760 7550614 ~ 7572968 (+)
si:ch211-12e13.1 NA coding downstream 469381 7576235 ~ 7597214 (+)
G59687 NA non-coding upstream 52705 7027298 ~ 7029309 (+)
G59627 NA non-coding upstream 266508 6815248 ~ 6815506 (+)
G59543 NA non-coding upstream 340725 6741041 ~ 6741289 (+)
G59544 NA non-coding upstream 341086 6740664 ~ 6740928 (+)
G59516 NA non-coding upstream 747223 6334494 ~ 6334791 (+)
G59696 NA non-coding downstream 72639 7179493 ~ 7263343 (+)
G59803 NA non-coding downstream 387034 7493888 ~ 7494204 (+)
G59804 tia1,LOC104967008 non-coding downstream 391635 7498489 ~ 7504014 (+)
G59833 NA non-coding downstream 480941 7587795 ~ 7588630 (+)
G59826 NA non-coding downstream 523652 7630506 ~ 7631241 (+)
zgc:65851 LOC103361079,LOC101467048,LOC102210174 other upstream 31242 7009646 ~ 7050772 (+)
add2 LOC102210956,LOC102786375 other upstream 85158 6969119 ~ 6996856 (+)
kat6a kat6a,LOC102311194,LOC106937639,LOC106932925 other upstream 363130 6674864 ~ 6718884 (+)
G59347 NA other upstream 1584260 5495155 ~ 5497754 (+)
golga3 golga3,LOC102797501 other upstream 1612804 5448061 ~ 5469210 (+)
LOC120560567 ier3ip1,yee9,LOC103361062,LOC100710589,LOC107393509,LOC105014506,LOC103152384 other downstream 467871 7574725 ~ 7576136 (+)
susd1 susd1 other downstream 493238 7600092 ~ 7623715 (+)
zbtb26 LOC104940087,LOC100710858,LOC102306976,LOC102206222,LOC101473380,LOC102792103 other downstream 518882 7625736 ~ 7630180 (+)
atp2a2a atp2a2,LOC102794349,LOC101476777,LOC102310403 other downstream 740817 7847671 ~ 7878371 (+)
cux2b cux2,LOC102795992 other downstream 840398 7947252 ~ 8051340 (+)

Expression


Co-expression Network