G59696


Basic Information

Item Value
gene id G59696
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 7179493 ~ 7263343 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU80171
ACAGTACTTTATTGTCAAATGACAATATGTTGATTACACATTCACAATTGGAATCAGTGCAAGaacatttgttttttcaagtCATTGTAAGTCTCTATCAATCAgagaaattcaaattcaaatgacAACTGGAAGTCATTTTGAGGAACCGgaccaactttaaacaacaacagagagcggTGCCAATAACACATAATATAATCACTGCTTTGTACTAGAAACGATACATGGAAGTTGTATTTGGTTGCGGTGATTTCTGGACACAAGACATTGAGCTTCACACTACAGAAATATTCTCTCACCGTGGAACTGTCTGCtcaacaaagaagaaaaacttATCGAGTTCCAAGAATCCATGCCTAAACATGCCCCTTCCCTGAAGCCTGACGCTATGTAATGAAATGAGTCAATCATCGATGCTGAGTGGTTCTTTTCAGAGCCTATCATTTGGTTAGTTAGCGCACACATATTCTGTGTTGTGAATTACCACAACCCTCTGTTGCCAAATGCTGTGACTCCAACACTTTCTCAACATGTATACAAAGAATGTGTTTAGTCATCTAAGACAGAGGTCACACATTAAAAAGAGTTAGTTTTTTTGGTCCTGATTAAGCCAAGATTTCTCAAGACTAAAAAATGATTATCTGACTCCTACAGACAATTTTAACCTGCGCAGGTTGGTAATATTTGTACTGCAAGTCCGTCAGCATCAATCAGTATATTGCACTTCCTAcgccctcttcctcctccagtgCATTAAGTCATGTTGCCATTCTTACAGGAAAAACATGAAAtggttatatattattattagtgctgtcagttaaacgcgttattaagggcgttaacgcaaacccattttaacggcgtcaatttttttttaatcgcgcgattaacgttctttttggcctagcgaactttgtagtttttttccacatgcggttgcaacaactagtaacgttagaaaaactaccaACACCAtgccggatctagctagaccggaaactaaacaacagccacgccgcacacacttgtttgggctcgcgagccagccaaagagtagcaggctaacgttaggttttgagtggatggcgagcagGAGACggcgaaatggatgccaataagattctgaatggaaagtttgaAGCGCAacggttccattgacaagaccaaagtgatgtgtgtgttttgttgttgtgaacgGAGccatcatcgcagcacgtccagtctgaaataccacttgatggccaagctcacagctgatgccaattctccgccccccctcgtcaaagccaggcgacaaaagcacaaaacaagccgatccactttagagcattaaaatgagaaaaaaaaaataataatgggacaaaaataaatcaagggacatttagaatagataaaaatgtgcgaatGATTgagagttaactatgacattaacgcgattaatcgcgattaaatattttaatcgtttgacagcactaattatTATATATCATCATGGCCTATCAACAAAGGTTGATGGCCACATGTCTCATGTATGAAATCTGGAGTAGAAAAgcagtttgtttttcttgtcaACACCCATCGTCACCTTTTTCAGAGCGGCCACGGTATTGAACTCCGAACGCAAAACCGATATTAAACAGTCAAAAAATAAAGAGCTGCACAAATATAGTCTCTCCACTGATTGTACagtgaggaaaacaaaaaggtgCGACATACATACACAGCAAAAATGTGGTACAACTTCAAACGGCTGCACAAATTCAATTAATATTTAACAGGTCCCCCGCGCTCAAAAGAATTATcttacaaaacataaaacaaacaaatggatTGATATGACATCCGACAGGCGGCAGCTACCACACGCTACATTCATCGTCCCAGTGTTTTGTCTACAGTGACTTATCTGGTCAGGGTCCGTAGTTTTCTAACAGTTCAGAATAAGAAATCACAGCCTACCCATCCTCAGATTTGGTCCTTTGTTTCAGCAGGCGAGTATCAGCATTTGAATAACTTCGTTGATCTTGTCAAGTCATTCCACATCCTCTAGGATTTAGCAGAGCTTTCCTGACCTGGACTTGGACCGTGAGAATGTGGGACATGTCATGTGTTTGATTAAAAGGTCTGTCTCCCCGCCCGCCCACTGGGATGCAACTACTTCATTCACAAACGTTAAATTGTTGCAATTGCTAAACCGCTAAATCGTTTCCTCTAAATCCCTCTTTTTGAACAGCCGTGTCCTTTAGTGCTGTGCATTGGGCTGTAAAGAGTGACattgcacttaaaaaaaacaaaaaacgtatGTGTTGGTAAAACGTATGTATCACCttttcaaaaccaaaaacacaaggaatggattAAACTTTGTGTTCATCTGCGTTAGCGAAAGTTCTCATTTCAACCGACAAAATGGACGTTCATTGGCTAGAAATGAGAATCTGCTTTTTTTCTACCTCTGTCTGAGATCACAGACCAATTGTGTAGAAAATGACTCACAATTTAGATGGTAAATCTGCAATTTAGTCTACTGGATTTGTGCCTGTGTGAGAACTGAGAGCATGACAGGCATAGCAACAGTTACTAGGGGACAGGGGTTAGTGAATGGCCAATGTATGTAACAAGAAAAACTGATTATATTCATTGCACCTGAAAGCTTAATTAAGATGAATTATTAGTAATTTCCCCGCAACTGAACAAATATCTCTGCTTCAAAAGCTGACAGCACACATGTACCTAAATGGTTAACAGTATAAACACAGAAGCAGTAATGGATCGGTgatgttgagagagagagagagagagagagagagagcagcagtggtTGAGCGAGCTACAGAGGGAGCGCAGTAATCCGAGGAATAAAAGGCTCTCGTCTCGCAGCAccttctgaaacacacacacacacacacacacacacacacacacacacacagtgAAGGTGCCACACTGTCGGATTATGAGTGAACGCAGAGCTTCATCCTGTCAGTTTCTGTCAGGGGAACTTGTGCGCAGGTATGAGACCCAAGAGACAAACGGCAATTGGAATTCAGAACACGCCATTATTGGCTGGGGAGGGGGTTACACACCCACGTTAGGCCCTAAGGCTCTTGTTGAAGGCCAGAAGTGTTCTGActctgcaaaaagaaaaagaaaaaaagaaaagagaaggtccaggcagagggcaggttctctgcagatacagacaccacCCCACACTGCTAGTTGGTTATGAGGATTGAGAGGGATAACTTTTGTATTAGtctaaacatgttttttttttgacgaAAGAATTGCGTATTATATCTTTAAGGAGCTACTTATACACCCACGGGTGATGCTATTTCATCTtggttttatttcatatttaccTAGTCTAGACAATCTCATTCTCTATCTGAACAGAGTAGAAGAATAGGAAGCTTCTTAAATAACTCAAGTCGTCTGGCTCTGAGCTAGGATAACATTACATCCTAGTCAAACTTCCAGTGTGATTTCTAGCAGGTATTCGGAGATGTTTGAGAAATACGGGCCCTGGTCAGCAGAGCTTCACCGGGTCAGAGGGGAGAAGTTGCCAGCTAGGCTGTGGGCCGGGGCCCTGCCCTGCAGCAGACGGTCCTCCACCCCTGGGTGGCCCTGTGGGCCCCAATACTTCCCTTCCCTTGCTAATCCAGGTCCAGGATCTGCTCAGCAACAATGTCCATGGCTGCAGAGGCCTTGATAGAGCTCCCTGCAGAGCCAGAGTCCACAAACATCTGGGGTATTTCGTTCCCAAAGTAGATTTTGCTGTTGGCTGCGATGGCCTTGTACTTCATTAGCTGCAAGTACTCTGGTGTTAACTTCAGCTGCAAGAG
>TU80173
ACAGTACTTTATTGTCAAATGACAATATGTTGATTACACATTCACAATTGGAATCAGTGCAAGaacatttgttttttcaagtCATTGTAAGTCTCTATCAATCAgagaaattcaaattcaaatgacAACTGGAAGTCATTTTGAGGAACCGgaccaactttaaacaacaacagagagcggTGCCAATAACACATAATATAATCACTGCTTTGTACTAGAAACGATACATGGAAGTTGTATTTGGTTGCGGTGATTTCTGGACACAAGACATTGAGCTTCACACTACAGAAATATTCTCTCACCGTGGAACTGTCTGCtcaacaaagaagaaaaacttATCGAGTTCCAAGAATCCATGCCTAAACATGCCCCTTCCCTGAAGCCTGACGCTATGTAATGAAATGAGTCAATCATCGATGCTGAGTGGTTCTTTTCAGAGCCTATCATTTGGTTAGTTAGCGCACACATATTCTGTGTTGTGAATTACCACAACCCTCTGTTGCCAAATGCTGTGACTCCAACACTTTCTCAACATGTATACAAAGAATGTGTTTAGTCATCTAAGACAGAGGTCACACATTAAAAAGAGTTAGTTTTTTTGGTCCTGATTAAGCCAAGATTTCTCAAGACTAAAAAATGATTATCTGACTCCTACAGACAATTTTAACCTGCGCAGGTTGGTAATATTTGTACTGCAAGTCCGTCAGCATCAATCAGTATATTGCACTTCCTAcgccctcttcctcctccagtgCATTAAGTCATGTTGCCATTCTTACAGGAAAAACATGAAAtggttatatattattattagtgctgtcagttaaacgcgttattaagggcgttaacgcaaacccattttaacggcgtcaatttttttttaatcgcgcgattaacgttctttttggcctagcgaactttgtagtttttttccacatgcggttgcaacaactagtaacgttagaaaaactaccaACACCAtgccggatctagctagaccggaaactaaacaacagccacgccgcacacacttgtttgggctcgcgagccagccaaagagtagcaggctaacgttaggttttgagtggatggcgagcagGAGACggcgaaatggatgccaataagattctgaatggaaagtttgaAGCGCAacggttccattgacaagaccaaagtgatgtgtgtgttttgttgttgtgaacgGAGccatcatcgcagcacgtccagtctgaaataccacttgatggccaagctcacagctgatgccaattctccgccccccctcgtcaaagccaggcgacaaaagcacaaaacaagccgatccactttagagcattaaaatgagaaaaaaaaaataataatgggacaaaaataaatcaagggacatttagaatagataaaaatgtgcgaatGATTgagagttaactatgacattaacgcgattaatcgcgattaaatattttaatcgtttgacagcactaattatTATATATCATCATGGCCTATCAACAAAGGTTGATGGCCACATGTCTCATGTATGAAATCTGGAGTAGAAAAgcagtttgtttttcttgtcaACACCCATCGTCACCTTTTTCAGAGCGGCCACGGTATTGAACTCCGAACGCAAAACCGATATTAAACAGTCAAAAAATAAAGAGCTGCACAAATATAGTCTCTCCACTGATTGTACagtgaggaaaacaaaaaggtgCGACATACATACACAGCAAAAATGTGGTACAACTTCAAACGGCTGCACAAATTCAATTAATATTTAACAGGTCCCCCGCGCTCAAAAGAATTATcttacaaaacataaaacaaacaaatggatTGATATGACATCCGACAGGCGGCAGCTACCACACGCTACATTCATCGTCCCAGTGTTTTGTCTACAGTGACTTATCTGGTCAGGGTCCGTAGTTTTCTAACAGTTCAGAATAAGAAATCACAGCCTACCCATCCTCAGATTTGGTCCTTTGTTTCAGCAGGCGAGTATCAGCATTTGAATAACTTCGTTGATCTTGTCAAGTCATTCCACATCCTCTAGGATTTAGCAGAGCTTTCCTGACCTGGACTTGGACCGTGAGAATGTGGGACATGTCATGTGTTTGATTAAAAGGTCTGTCTCCCCGCCCGCCCACTGGGATGCAACTACTTCATTCACAAACGTTAAATTGTTGCAATTGCTAAACCGCTAAATCGTTTCCTCTAAATCCCTCTTTTTGAACAGCCGTGTCCTTTAGTGCTGTGCATTGGGCTGTAAAGAGTGACattgcacttaaaaaaaacaaaaaacgtatGTGTTGGTAAAACGTATGTATCACCttttcaaaaccaaaaacacaaggaatggattAAACTTTGTGTTCATCTGCGTTAGCGAAAGTTCTCATTTCAACCGACAAAATGGACGTTCATTGGCTAGAAATGAGAATCTGCTTTTTTTCTACCTCTGTCTGAGATCACAGACCAATTGTGTAGAAAATGACTCACAATTTAGATGGTAAATCTGCAATTTAGTCTACTGGATTTGTGCCTGTGTGAGAACTGAGAGCATGACAGGCATAGCAACAGTTACTAGGGGACAGGGGTTAGTGAATGGCCAATGTATGTAACAAGAAAAACTGATTATATTCATTGCACCTGAAAGCTTAATTAAGATGAATTATTAGTAATTTCCCCGCAACTGAACAAATATCTCTGCTTCAAAAGCTGACAGCACACATGTACCTAAATGGTTAACAGTATAAACACAGAAGCAGTAATGGATCGGTgatgttgagagagagagagagagagagagagagagcagcagtggtTGAGCGAGCTACAGAGGGAGCGCAGTAATCCGAGGAATAAAAGGCTCTCGTCTCGCAGCAccttctgaaacacacacacacacacacacacacacacacacacacacacacacacacacacagaacacacacacacacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU80171 True 3857 lncRNA 0.42 2 7179493 7183437
TU80173 False 2970 lncRNA 0.41 2 7179493 7263343

Neighbor

gene id symbol gene type direction distance location
bmp10 bmp10,LOC101468345 coding upstream 36473 7140197 ~ 7143020 (+)
arhgap25 arhgap25 coding upstream 42642 7108813 ~ 7136851 (+)
cds2 LOC104924982,LOC103361071,LOC106535345,LOC107098564,LOC105938002 coding upstream 77599 7075326 ~ 7101894 (+)
mxd1 mxd1,LOC106535940,LOC102787379 coding upstream 152606 7008164 ~ 7026887 (+)
snrnp27 snrnp27,LOC102787093 coding upstream 172234 6997153 ~ 7007259 (+)
rchy1 rchy1 coding downstream 248696 7512039 ~ 7519772 (+)
LOC120560565 LOC103361063,LOC101470473,LOC101159109,LOC100710325,LOC108235010,LOC107393511 coding downstream 287271 7550614 ~ 7572968 (+)
si:ch211-12e13.1 NA coding downstream 312892 7576235 ~ 7597214 (+)
LOC120560421 p2rx4,LOC102791813 coding downstream 369349 7632692 ~ 7639409 (+)
LOC120560946 p2rx4,LOC102791813 coding downstream 386430 7649773 ~ 7657652 (+)
G59694 NA non-coding upstream 72639 7082014 ~ 7106854 (+)
G59687 NA non-coding upstream 150184 7027298 ~ 7029309 (+)
G59627 NA non-coding upstream 363987 6815248 ~ 6815506 (+)
G59543 NA non-coding upstream 438204 6741041 ~ 6741289 (+)
G59544 NA non-coding upstream 438565 6740664 ~ 6740928 (+)
G59803 NA non-coding downstream 230545 7493888 ~ 7494204 (+)
G59804 tia1,LOC104967008 non-coding downstream 235146 7498489 ~ 7504014 (+)
G59833 NA non-coding downstream 324452 7587795 ~ 7588630 (+)
G59826 NA non-coding downstream 367163 7630506 ~ 7631241 (+)
G59837 NA non-coding downstream 372252 7635595 ~ 7636054 (+)
zgc:65851 LOC103361079,LOC101467048,LOC102210174 other upstream 128721 7009646 ~ 7050772 (+)
add2 LOC102210956,LOC102786375 other upstream 182637 6969119 ~ 6996856 (+)
kat6a kat6a,LOC102311194,LOC106937639,LOC106932925 other upstream 460609 6674864 ~ 6718884 (+)
G59347 NA other upstream 1681739 5495155 ~ 5497754 (+)
golga3 golga3,LOC102797501 other upstream 1710283 5448061 ~ 5469210 (+)
LOC120560567 ier3ip1,yee9,LOC103361062,LOC100710589,LOC107393509,LOC105014506,LOC103152384 other downstream 311382 7574725 ~ 7576136 (+)
susd1 susd1 other downstream 336749 7600092 ~ 7623715 (+)
zbtb26 LOC104940087,LOC100710858,LOC102306976,LOC102206222,LOC101473380,LOC102792103 other downstream 362393 7625736 ~ 7630180 (+)
atp2a2a atp2a2,LOC102794349,LOC101476777,LOC102310403 other downstream 584328 7847671 ~ 7878371 (+)
cux2b cux2,LOC102795992 other downstream 683909 7947252 ~ 8051340 (+)

Expression


Co-expression Network