G59833


Basic Information

Item Value
gene id G59833
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 7587795 ~ 7588630 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU80351
tggtcaaatagcccttacacagcctggaggtgtgtttggggtcattgtcctgttgaaaaataaatgatcgtccaactaaacgcaaactggatgggatggcatgtcactgcaggatgctgtggtagccatgctggttcaatatgccttcaattttgaataaatccagcaaaacacccccacaccatcacacctcctcctccatgcttcacggtgggaaccaggcatgtagaatccatccgttcaccttttctgcatcgcacaaagacatggcggttggaaccaaagatctcaaattttgactcatcagaccaaagcacagatttccactggtccattccttgtgtttcttggcccaaacaaatctcttctgcttgttgcctctccttagcagtggtttcctagcagctacttgaccatgaaggcctgattcgggCAGTCTctactctgtgtggcattcatctgagctgctgttaacttgctatttctgaggctggtgactcggatgaacttatcctcagcagcagaggtgactcttggtcttcctttcctggggcggtcctcatgtgagccagtttcgttgtagttcttgatggtttttgcgactgcacttggggacacattcaaagtttacTCAAATTTTCGGACTGACTgaaccttcatttgttaaagtaatgatggccactcgtttctctttacttagctgattggttcttgccataatatgaattctaacagttgtccaatagggctgtcggctgtgtatcaacctgacttctgcacaacacaactgatggtcccaaccccattaataagggaaaaaagtccactaattaacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU80351 True 836 lncRNA 0.46 1 7587795 7588630

Neighbor

gene id symbol gene type direction distance location
LOC120560565 LOC103361063,LOC101470473,LOC101159109,LOC100710325,LOC108235010,LOC107393511 coding upstream 14827 7550614 ~ 7572968 (+)
rchy1 rchy1 coding upstream 68023 7512039 ~ 7519772 (+)
bmp10 bmp10,LOC101468345 coding upstream 444775 7140197 ~ 7143020 (+)
arhgap25 arhgap25 coding upstream 450944 7108813 ~ 7136851 (+)
cds2 LOC104924982,LOC103361071,LOC106535345,LOC107098564,LOC105938002 coding upstream 485901 7075326 ~ 7101894 (+)
LOC120560421 p2rx4,LOC102791813 coding downstream 44062 7632692 ~ 7639409 (+)
LOC120560946 p2rx4,LOC102791813 coding downstream 61143 7649773 ~ 7657652 (+)
gucd1 gucd1 coding downstream 69542 7658172 ~ 7663129 (+)
LOC120561481 NA coding downstream 96015 7684645 ~ 7684763 (+)
LOC120561492 NA coding downstream 102044 7690674 ~ 7690792 (+)
G59804 tia1,LOC104967008 non-coding upstream 83781 7498489 ~ 7504014 (+)
G59803 NA non-coding upstream 93591 7493888 ~ 7494204 (+)
G59696 NA non-coding upstream 324452 7179493 ~ 7263343 (+)
G59694 NA non-coding upstream 480941 7082014 ~ 7106854 (+)
G59687 NA non-coding upstream 558486 7027298 ~ 7029309 (+)
G59826 NA non-coding downstream 41876 7630506 ~ 7631241 (+)
G59837 NA non-coding downstream 46965 7635595 ~ 7636054 (+)
G59839 NA non-coding downstream 58075 7646705 ~ 7647149 (+)
G59931 pptc7,LOC106585473,LOC104951761 non-coding downstream 332147 7920777 ~ 7924556 (+)
G60082 NA non-coding downstream 638262 8226892 ~ 8227173 (+)
LOC120560567 ier3ip1,yee9,LOC103361062,LOC100710589,LOC107393509,LOC105014506,LOC103152384 other upstream 11659 7574725 ~ 7576136 (+)
zgc:65851 LOC103361079,LOC101467048,LOC102210174 other upstream 537023 7009646 ~ 7050772 (+)
add2 LOC102210956,LOC102786375 other upstream 590939 6969119 ~ 6996856 (+)
kat6a kat6a,LOC102311194,LOC106937639,LOC106932925 other upstream 868911 6674864 ~ 6718884 (+)
G59347 NA other upstream 2090041 5495155 ~ 5497754 (+)
susd1 susd1 other downstream 11462 7600092 ~ 7623715 (+)
zbtb26 LOC104940087,LOC100710858,LOC102306976,LOC102206222,LOC101473380,LOC102792103 other downstream 37106 7625736 ~ 7630180 (+)
atp2a2a atp2a2,LOC102794349,LOC101476777,LOC102310403 other downstream 259041 7847671 ~ 7878371 (+)
cux2b cux2,LOC102795992 other downstream 358622 7947252 ~ 8051340 (+)
LOC120560006 NA other downstream 834559 8423189 ~ 8427745 (+)

Expression


Co-expression Network