G59931 (pptc7,LOC106585473,LOC104951761)


Basic Information

Item Value
gene id G59931
gene name pptc7,LOC106585473,LOC104951761
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 7920777 ~ 7924556 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU80483
TGGAAAAGTACTGGCACTGGCACAGACAGAGATCTGTTCCCAAAACATGCAGTCACTGGTGTTATACGTTGGCGCATGCTTTGTTGTTGGGAAGCAGCGTGAAGGAGGAAAGGGAGTCTGAAAGTGTCCTGCATGGAGCAAGTCAGGACAAGAGCCTTTCCCAGGCCTTCTTAATGCGATCTGGCGGTTCTGACTCACGATGAAAAAATCTTCCATCCAGCCACCACTTAAAGTGAACGGGCGGAAGAAACAAACCTAACCCTCGACAGTGCGCTCCGATCCAAACCACATGGAAAACGTACCGTTTCCTTGGCACGCACAGTGTGCCCTCCACAACTTTACTGTCCGGCGGAGTGCATGGCATGGATCTTAATTAGTTTAGTGAGGTTTGGAACAAGGTTAGAGGCGCGGAGCAGGAAACCTAGGGAGCATCACGGTCCGCAGTCCCGCGATAACACGTTTAATACAAAACAGGTCGGAAAAGGAGGAGACCTTGGCAGGCTTTTTGTTCTCATTAAACTAAGATAGGATCATCACAACAACTGTAGAGGAAAGAACAGGGCGATGaccagtagggctgggtattagacatgcaccgattacaactttctaggccgattccgattttctttgagttaggccagccgataacGATTTCATTtcttctaaccactttacagcacacacaaatatttattttctatcttcacatgggtctggctgctcccggattttacAAGCAAGCATAATGGCGGcacattcagaatacaatctcatattttacgaagatagttcaccgtaacgtgtttctgaaaacatgtaAAGCGAGAAacaggccatgcagttgctgaatctatcttcatttcagatcgacaaaggtcagtttaaaagatcttCGTCAAATTTTGAGAGGTTGTTCGTCACGCTAACATAAGTACACTGATTcactagtcaagggctagcactccaccaatcagattggtcatcgagtccgactgcccgccctccgacccagcaagtcaggtcggccaaaatgaaggccgacggctcctccgactgacgacgccACGGAacgcaccgaacagactcgagtcaccgacctcgccagactatcgggttggtgtgtcagggccttatcgttaagacagccaatcacaatcattactagatcttggtagaagcatgctgcgtgctcactgacgctgatgagatttactccttaggtattgaagttgggtattgaatgacgaggcattttttttttccttactcaatactttagaggcaattcggtcggtgcctaaaaaagtattgaattctgTCCCCGTCCCGAATGACCACGGCCACGCGGAATCTGCAGACACAGAATTCTCcacagattttaaacaaaaaataaagcaaaatatCCAGACGTCCTGGTACCACAGATGGTGGACATGGCCTGAGCATATTGTTGCTTTTCCCCAGGCACTGGTTATGAACAGGAATATTCATTCACATAAGCACAGAAGGTATTCTACAGGAGAACGCATTGATAGGGTCCCGTCGACTTTAATGTGTATTATGAACACTGGGATCCTGCGTTTCCGGCAGCTTTACTCACCCAGCAGGGGCACTTTGTTCTGCAGCAGCTCGTAGTAGCTGCTGGTGAGGACTCCCACTGGGTTGCTGGGGACGAAGCGTCCTTCCTTCACCAGCCTCTCGCACGTCTTCATCAGTGTGCCTGAAAACTGCGATGGGTCTACGCCATAGTCTCGCCAGCCACCTACTCCATCTGCTACCCCAAAACATCAGCGGATCTGTGTCGGGCGATGAAGCACGCGTCGTCCCCATAGCACATCCCTTTCTTCAGTATGCCTTTGCGAAAGTCCTTGCCGAAGCCACAGCTCGCCGTCACCAGGCTGTAGTCGCGGCCGTCTGTCTGAGAAAGTCCGCCGATGACAGCTCTGGCCACAAGTCTACCGTACGACAGGACGGACAACATCACCTACACACCAGCTCCTACCAAAACAAACCGGCCAAGCTAGCAACCCTGCTAGCTTAGCGGCGATGTCCAATGTTGACTTGCTAATGTGAATGTGAGGCTGAGCTAGCCAGACACTGCCGCCGCCGCCGACAACAGCCGCCACGCACGCATACGCAATGATGTAAGTACAGACTCGAGGAGCTTTGTTCTTGCGCCGTGATATctgggaagaaaagaaagaaaaaaaatcaccgAAAAAAGTCGCCTCTTCTACTCCAAAAGACCCGTAAGTGCTGGTTCTCCGCGGCCATGGTGTCAGTCCTGTCTTTGAGACTACTAGCGATATATAACACAAAGTGTGAACCGGTTGCCCCGTGGCCTCACACACTGCGCTCTGCTAGCAAAGTCTTGTGA

Function

symbol description
pptc7 Enables protein serine/threonine phosphatase activity. Involved in peptidyl-serine dephosphorylation and regulation of ubiquinone biosynthetic process. Located in mitochondrial matrix.

NR:

description
PREDICTED: protein phosphatase PTC7 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU80483 True 2380 lncRNA 0.49 2 7920777 7924556

Neighbor

gene id symbol gene type direction distance location
rad9b NA coding upstream 7257 7904789 ~ 7913520 (+)
LOC120560606 NA coding upstream 16183 7898563 ~ 7904594 (+)
LOC120560607 LOC106931442,LOC103152401,LOC103469522,LOC102221826,LOC101074150,LOC101161315,LOC105014186,LOC106579958,LOC103397036 coding upstream 20253 7888678 ~ 7900524 (+)
ift81 ift81 coding upstream 74972 7821305 ~ 7845805 (+)
LOC120561497 NA coding upstream 221526 7699133 ~ 7699251 (+)
mtmr3 mtmr3 coding downstream 130809 8055365 ~ 8078168 (+)
LOC120560501 mtmr3,LOC103152423 coding downstream 153746 8078302 ~ 8083374 (+)
bicdl1 bicdl1 coding downstream 248004 8172560 ~ 8204186 (+)
LOC120560868 NA coding downstream 406829 8331385 ~ 8402569 (+)
LOC120560867 NA coding downstream 463266 8387822 ~ 8389118 (+)
G59839 NA non-coding upstream 273628 7646705 ~ 7647149 (+)
G59837 NA non-coding upstream 284723 7635595 ~ 7636054 (+)
G59826 NA non-coding upstream 289536 7630506 ~ 7631241 (+)
G59833 NA non-coding upstream 332147 7587795 ~ 7588630 (+)
G59804 tia1,LOC104967008 non-coding upstream 416763 7498489 ~ 7504014 (+)
G60082 NA non-coding downstream 302336 8226892 ~ 8227173 (+)
G60084 gcn1 non-coding downstream 307448 8232004 ~ 8238788 (+)
G60080 NA non-coding downstream 377702 8302258 ~ 8313113 (+)
G60109 NA non-coding downstream 400497 8325053 ~ 8326953 (+)
G60120 NA non-coding downstream 447710 8372266 ~ 8372551 (+)
atp2a2a atp2a2,LOC102794349,LOC101476777,LOC102310403 other upstream 42406 7847671 ~ 7878371 (+)
zbtb26 LOC104940087,LOC100710858,LOC102306976,LOC102206222,LOC101473380,LOC102792103 other upstream 290597 7625736 ~ 7630180 (+)
susd1 susd1 other upstream 297062 7600092 ~ 7623715 (+)
LOC120560567 ier3ip1,yee9,LOC103361062,LOC100710589,LOC107393509,LOC105014506,LOC103152384 other upstream 344641 7574725 ~ 7576136 (+)
zgc:65851 LOC103361079,LOC101467048,LOC102210174 other upstream 870005 7009646 ~ 7050772 (+)
cux2b cux2,LOC102795992 other downstream 22696 7947252 ~ 8051340 (+)
LOC120560006 NA other downstream 498633 8423189 ~ 8427745 (+)
LOC120560007 NA other downstream 506981 8431537 ~ 8434672 (+)
vps37ba vps37b,vps37c,LOC102776795 other downstream 1066885 8991441 ~ 9014903 (+)
ppp3cca LOC104934810,LOC100705072,LOC105915415,LOC101486266,LOC102777092,LOC103366803,LOC102200614,LOC101072650,LOC106932221 other downstream 1093335 9017891 ~ 9055765 (+)

Expression


Co-expression Network