G60189


Basic Information

Item Value
gene id G60189
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 8647221 ~ 8647449 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU80794
GCTCACTCCACTCTTTAAATGCCTCTCACTTGCTCAGACAGCTGATGCTACATCATAATGGTTACTATGGATAGGTTATGTCATATTAGGTCTATCATTTGACGGGCTTGTTTGGGAATTCCAATTCAATATGATGTTCAAACCTTGCTCTGACAAATCACATCGAGATTCATTTCACTTTGACAAGctgagttaaaggtcccatgacatggttctctttggatgcttt

Function

GO:

id name namespace
GO:0031589 cell-substrate adhesion biological_process
GO:0007160 cell-matrix adhesion biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU80794 True 229 lncRNA 0.40 1 8647221 8647449

Neighbor

gene id symbol gene type direction distance location
LOC120560486 LOC107690107 coding upstream 165043 8465171 ~ 8482178 (+)
LOC120560868 NA coding upstream 244652 8331385 ~ 8402569 (+)
LOC120560867 NA coding upstream 258103 8387822 ~ 8389118 (+)
bicdl1 bicdl1 coding upstream 443035 8172560 ~ 8204186 (+)
LOC120560501 mtmr3,LOC103152423 coding upstream 563847 8078302 ~ 8083374 (+)
zgc:110329 LOC103366798,LOC104939353,LOC104956029 coding downstream 163105 8810554 ~ 8836973 (+)
slc4a5a slc4a5,LOC100703988,LOC101470466,LOC102293566,LOC102195261 coding downstream 214521 8861970 ~ 8907724 (+)
zgc:113436 LOC102776507 coding downstream 274834 8922283 ~ 8933253 (+)
LOC120560802 abcb9,LOC106965289 coding downstream 292380 8939829 ~ 8965106 (+)
LOC120560490 abcb9 coding downstream 324837 8972286 ~ 8989363 (+)
LOC120560290 NA non-coding upstream 48833 8597542 ~ 8598388 (+)
G60182 NA non-coding upstream 55748 8591253 ~ 8591473 (+)
G60177 NA non-coding upstream 164099 8482895 ~ 8483122 (+)
G60174 NA non-coding upstream 168334 8478579 ~ 8478887 (+)
trnaw-cca_8 NA non-coding upstream 193351 8453799 ~ 8453870 (+)
G60201 NA non-coding downstream 84264 8731713 ~ 8731922 (+)
G60223 NA non-coding downstream 137204 8784653 ~ 8784920 (+)
G60229 NA non-coding downstream 186178 8833627 ~ 8856430 (+)
G60232 NA non-coding downstream 206824 8854273 ~ 8929828 (+)
G60275 NA non-coding downstream 318056 8965505 ~ 8989713 (+)
LOC120560007 NA other upstream 212549 8431537 ~ 8434672 (+)
LOC120560006 NA other upstream 219476 8423189 ~ 8427745 (+)
cux2b cux2,LOC102795992 other upstream 595881 7947252 ~ 8051340 (+)
atp2a2a atp2a2,LOC102794349,LOC101476777,LOC102310403 other upstream 768850 7847671 ~ 7878371 (+)
zbtb26 LOC104940087,LOC100710858,LOC102306976,LOC102206222,LOC101473380,LOC102792103 other upstream 1017041 7625736 ~ 7630180 (+)
vps37ba vps37b,vps37c,LOC102776795 other downstream 343992 8991441 ~ 9014903 (+)
ppp3cca LOC104934810,LOC100705072,LOC105915415,LOC101486266,LOC102777092,LOC103366803,LOC102200614,LOC101072650,LOC106932221 other downstream 370442 9017891 ~ 9055765 (+)
LOC120560959 golga7,LOC104937560,LOC106585131 other downstream 1279501 9926950 ~ 9981054 (+)
LOC120561142 NA other downstream 2078989 10726438 ~ 10746953 (+)
LOC120561144 NA other downstream 2100667 10748116 ~ 10752440 (+)

Expression


Co-expression Network