G60273


Basic Information

Item Value
gene id G60273
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 8989818 ~ 8991004 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU80913
ACACTTTAACACCTGAACACTAcatgttgcagttatgtaagtcaatggaTAAATGGTTTAAACATTCAGCTTCACTCCAAGTAGTAGTAGTCTAGTAGGCTAGCATTAATTAGTATgattgctgaccaaaccaaccttaatattggcaattcaattgtatgaaaaaaataacaatatccacttttataAAATGGATagtgttatattatatatttggaACGTACATTAGGAATCAAAGAAAGGGTATGCAGGTTCATCTGACAGAAGTGTGGGGTACCTCACACTTCCAAAGTGGCATTGCCATTGGAAATAAAACTTAATCAATGAATGGCTACTATGACCGTTACATGGGAGTACGGGCGGAAAATAGCAATTGTGCTAAAACCTGGCTGCAATGCATCTCTCCTTATTTTTATACAAGGTTAATATTTAATTGTGCATTGTCCTGTctaaataaaatgacaatacaTGTAACTGATATATTATCTTTAATAATAGGTGATATGCTGCAGTTgatttactgtattttgtgtgttttatatatacGTCATCATCGCACTCAAGACAAATAAatgcactattggacttatttgcactaccaccatgacacacactctcatagagcaccttaccttgcatactgaatcacagggtcagtccctgtcctgtcactgcaagcgtctcatgctcatacccttagtacattcattcatgtgtatgttgtgtgtgatgtctttaagctactgggaccttgaatttccccttggggatca
>TU80914
ACACTTTAACACCTGAACACTAcatgttgcagttatgtaagtcaatggaTAAATGGTTTAAACATTCAGCTTCACTCCAAGTAGTAGTAGTCTAGTAGGCTAGCATTAATTAGTATgattgctgaccaaaccaaccttaatattggcaattcaattgtatgaaaaaaataacaatatccacttttataAAATGGATagtgttatattatatatttggaACGTACATTAGGAATCAAAGAAAGGGTATGCAGGTTCATCTGACAGAAGTGTGGGGTACCTCACACTTCCAAAGTGGCATTGCCATTGGAAATAAAACTTAATCAATGAATGGCTACTATGACCGTTACATGGGAGTACGGGCGGAAAATAGCAATTGTGCTAAAACCTGGCTGCAATGCATCTCTCCTTATTTTTATACAAGGTTAATATTTAATTGTGCATTGTCCTGTctaaataaaatgacaatacaTGTAACTGATATATTATCTTTAATAATAGGTGATATGCTGCAGTTgatttactgtattttgtgtgttttatatatacGTCATCATCGCACTCAAGACAAATAAatgcactattggacttatttgcactaccaccatgacacacactctcatagagcaccttaccttgcatactgaatcacagggtcagtccctgtcctgtcactgcaagcgtctcatgctcatacccttagtacattcattcatgtgtatgttgtgtgtgatgtctttaagctactgggaccttgaatttccccttggggatcaataaagtatctatctatctaaattaTTGTTTAACTAGTCTTCCtcaggttttgttttttacgtTTTTATGCATTTTACAGCGGCAGATGTACAAAtgctttgtgtttcttttcaagGCTTTCAATTTCATGATTTGTAATTCCACAAGTAAGCTGACTACAAAGAGAAGACCTGTGCCTTCTGTATGTTAAACTGAATTCACAATAGAGATCTATGACTCTCTGTGATGAAGATACATTAATTAATAACTGACATACATAACTTAATTGTATGaaacactataaataaaaaatgaatgtgtaaaactatactgtatgtctgcctTGGACACAAACATGTTGGATTAAAACCAAATGCTGCATTTAATGTCTCCTTGTAAACCGCTCGTTTAGATTTCAGTCGATGTAAATATGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU80913 False 773 lncRNA 0.36 1 8989818 8990590
TU80914 True 1187 lncRNA 0.35 1 8989818 8991004

Neighbor

gene id symbol gene type direction distance location
LOC120560490 abcb9 coding upstream 455 8972286 ~ 8989363 (+)
LOC120560802 abcb9,LOC106965289 coding upstream 24712 8939829 ~ 8965106 (+)
zgc:113436 LOC102776507 coding upstream 56565 8922283 ~ 8933253 (+)
slc4a5a slc4a5,LOC100703988,LOC101470466,LOC102293566,LOC102195261 coding upstream 82094 8861970 ~ 8907724 (+)
zgc:110329 LOC103366798,LOC104939353,LOC104956029 coding upstream 152845 8810554 ~ 8836973 (+)
tcima LOC104938922,LOC102777577,LOC103152810,LOC103353800,LOC101487124,LOC102217691 coding downstream 142543 9133547 ~ 9134580 (+)
LOC120560494 NA coding downstream 377195 9368199 ~ 9375746 (+)
marveld2b LOC104926564,LOC103371582,LOC102788930,LOC102293847,LOC101466532 coding downstream 2182015 11173019 ~ 11188211 (+)
oclnb LOC104926565,LOC103397562 coding downstream 2202483 11193487 ~ 11206112 (+)
gtf2h2 LOC100696048,LOC102788170,LOC101466805,LOC102292669,LOC102204724 coding downstream 2227947 11218951 ~ 11231887 (+)
G60275 NA non-coding upstream 105 8965505 ~ 8989713 (+)
G60232 NA non-coding upstream 59990 8854273 ~ 8929828 (+)
G60229 NA non-coding upstream 133388 8833627 ~ 8856430 (+)
G60223 NA non-coding upstream 204898 8784653 ~ 8784920 (+)
G60201 NA non-coding upstream 257896 8731713 ~ 8731922 (+)
trnaq-cug_4 NA non-coding downstream 222238 9213242 ~ 9213313 (+)
G60363 NA non-coding downstream 291808 9282812 ~ 9283636 (+)
G60378 NA non-coding downstream 472924 9463928 ~ 9464187 (+)
G60387 NA non-coding downstream 500006 9491010 ~ 9491626 (+)
G60410 NA non-coding downstream 780754 9771758 ~ 9772052 (+)
LOC120560007 NA other upstream 555146 8431537 ~ 8434672 (+)
LOC120560006 NA other upstream 562073 8423189 ~ 8427745 (+)
cux2b cux2,LOC102795992 other upstream 938478 7947252 ~ 8051340 (+)
atp2a2a atp2a2,LOC102794349,LOC101476777,LOC102310403 other upstream 1111447 7847671 ~ 7878371 (+)
zbtb26 LOC104940087,LOC100710858,LOC102306976,LOC102206222,LOC101473380,LOC102792103 other upstream 1359638 7625736 ~ 7630180 (+)
vps37ba vps37b,vps37c,LOC102776795 other downstream 437 8991441 ~ 9014903 (+)
ppp3cca LOC104934810,LOC100705072,LOC105915415,LOC101486266,LOC102777092,LOC103366803,LOC102200614,LOC101072650,LOC106932221 other downstream 26887 9017891 ~ 9055765 (+)
LOC120560959 golga7,LOC104937560,LOC106585131 other downstream 935946 9926950 ~ 9981054 (+)
LOC120561142 NA other downstream 1735434 10726438 ~ 10746953 (+)
LOC120561144 NA other downstream 1757112 10748116 ~ 10752440 (+)

Expression


Co-expression Network