G60387


Basic Information

Item Value
gene id G60387
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 9491010 ~ 9491626 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU81044
GCAAATGTCTTTTATTCTTTTCTCAGACACAATAGAGCACAAGGGGACTAGAGGGTGTGTAAGAGGTGGACTTCCTGTGATGAAGGAAAAACGACTGATCCAAAGCAACCTTAGCACAGAAATAGTATTACTCAGGCTGACCAAAGCATTTCATGGAGTTTTTTTTGACttgcaataaaaaaatcatacgTGCACTTCTTAATtgcaatattaaaaaaacatttctataaATTATTGTGAATGTCCTCGGCGGTGGCGTCTCTCGCATCTCTGACATCAGCCAGCAACAGTTTGTTTTCAGTCCATGATGTGAttgtgatgatttttttttctctttctctacaGTACAAATCTCTAGCTCTGCGTTCAAGAGATTCGAGCTGTAATAGACTTTGAGGTTTCTGCAAAATAAAGTGCTCGAACAACATGAGTCAAAGCTAAATTTTGATCACAACACAGTTCTGCAGTTGACACAGCACTGAAAATAACAATGGAAGAATTCACTTATACTGTAAACAGACAGCAGTTACAAAGTAATCTGATCCACAACAGTaatttattattcatttataatTTTCCTCATAGTTCTCATTTATACAACACTGGCTTTAAAGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU81044 True 617 lncRNA 0.36 1 9491010 9491626

Neighbor

gene id symbol gene type direction distance location
LOC120560494 NA coding upstream 115264 9368199 ~ 9375746 (+)
tcima LOC104938922,LOC102777577,LOC103152810,LOC103353800,LOC101487124,LOC102217691 coding upstream 356430 9133547 ~ 9134580 (+)
LOC120560490 abcb9 coding upstream 501647 8972286 ~ 8989363 (+)
LOC120560802 abcb9,LOC106965289 coding upstream 525904 8939829 ~ 8965106 (+)
zgc:113436 LOC102776507 coding upstream 557757 8922283 ~ 8933253 (+)
marveld2b LOC104926564,LOC103371582,LOC102788930,LOC102293847,LOC101466532 coding downstream 1681393 11173019 ~ 11188211 (+)
oclnb LOC104926565,LOC103397562 coding downstream 1701861 11193487 ~ 11206112 (+)
gtf2h2 LOC100696048,LOC102788170,LOC101466805,LOC102292669,LOC102204724 coding downstream 1727325 11218951 ~ 11231887 (+)
ankrd34bb NA coding downstream 1783392 11275018 ~ 11277484 (+)
LOC120561249 fut7,LOC103353858 coding downstream 2082354 11573980 ~ 11576354 (+)
G60378 NA non-coding upstream 26823 9463928 ~ 9464187 (+)
G60363 NA non-coding upstream 207374 9282812 ~ 9283636 (+)
trnaq-cug_4 NA non-coding upstream 277697 9213242 ~ 9213313 (+)
G60273 NA non-coding upstream 500006 8989818 ~ 8991004 (+)
G60275 NA non-coding upstream 501297 8965505 ~ 8989713 (+)
G60410 NA non-coding downstream 280132 9771758 ~ 9772052 (+)
G60414 NA non-coding downstream 295811 9787437 ~ 9787707 (+)
G60455 NA non-coding downstream 564374 10056000 ~ 10060136 (+)
G60453 NA non-coding downstream 581672 10073298 ~ 10090114 (+)
G60474 NA non-coding downstream 850473 10342099 ~ 10342380 (+)
ppp3cca LOC104934810,LOC100705072,LOC105915415,LOC101486266,LOC102777092,LOC103366803,LOC102200614,LOC101072650,LOC106932221 other upstream 435245 9017891 ~ 9055765 (+)
vps37ba vps37b,vps37c,LOC102776795 other upstream 476107 8991441 ~ 9014903 (+)
LOC120560007 NA other upstream 1056338 8431537 ~ 8434672 (+)
LOC120560006 NA other upstream 1063265 8423189 ~ 8427745 (+)
cux2b cux2,LOC102795992 other upstream 1439670 7947252 ~ 8051340 (+)
LOC120560959 golga7,LOC104937560,LOC106585131 other downstream 435324 9926950 ~ 9981054 (+)
LOC120561142 NA other downstream 1234812 10726438 ~ 10746953 (+)
LOC120561144 NA other downstream 1256490 10748116 ~ 10752440 (+)
G60897 NA other downstream 2434557 11926183 ~ 11926601 (+)
G61139 tubb2b,tubb4b,LOC103024866,LOC101061694,LOC105901187 other downstream 3429521 12921147 ~ 12923836 (+)

Expression


Co-expression Network