G60574


Basic Information

Item Value
gene id G60574
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 10735721 ~ 10736180 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU81259
tgagccacaaaacacaagggtaacacatcactgaatcatattaaatcaaatcaaagccaGTCAGTCCTGACTGATTTGAACACTGAAATGAAATAGAGAAATGCAGCCTTAAGTTTTTGTAGCACAGCAATAGCAAATTACAGGCATAAAGATATTGGGCCTGCGTGTTAAGCTGGGCCTAATCATTTTATAACAATACGGTAGGATAATTAAAAATCGGTATGACCTCATTCTGGTCAATACGTACACTAGGCTTTACACGAGtgtaaaaaacacaattatctcCAATAATTCGTATAAACTTCCAGTTGAACTGTTACTGAACAGTTGATAAATCATGCCAATTTACTGCACGGCggcagcataataataataaaccagcaTTATTACCTTGTGTTGCAGTCATAATACTAAAAATAAATCCTTATCTCCAAAACGTGTACCAGGAAAAGTGTGAGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU81259 True 460 lncRNA 0.36 1 10735721 10736180

Neighbor

gene id symbol gene type direction distance location
LOC120560494 NA coding upstream 1359975 9368199 ~ 9375746 (+)
tcima LOC104938922,LOC102777577,LOC103152810,LOC103353800,LOC101487124,LOC102217691 coding upstream 1601141 9133547 ~ 9134580 (+)
LOC120560490 abcb9 coding upstream 1746358 8972286 ~ 8989363 (+)
LOC120560802 abcb9,LOC106965289 coding upstream 1770615 8939829 ~ 8965106 (+)
zgc:113436 LOC102776507 coding upstream 1802468 8922283 ~ 8933253 (+)
marveld2b LOC104926564,LOC103371582,LOC102788930,LOC102293847,LOC101466532 coding downstream 436839 11173019 ~ 11188211 (+)
oclnb LOC104926565,LOC103397562 coding downstream 457307 11193487 ~ 11206112 (+)
gtf2h2 LOC100696048,LOC102788170,LOC101466805,LOC102292669,LOC102204724 coding downstream 482771 11218951 ~ 11231887 (+)
ankrd34bb NA coding downstream 538838 11275018 ~ 11277484 (+)
LOC120561249 fut7,LOC103353858 coding downstream 837800 11573980 ~ 11576354 (+)
G60566 NA non-coding upstream 31028 10686683 ~ 10704693 (+)
LOC120560597 NA non-coding upstream 32287 10702631 ~ 10703434 (+)
LOC120560596 NA non-coding upstream 33204 10701819 ~ 10702517 (+)
G60533 NA non-coding upstream 166835 10568306 ~ 10568886 (+)
G60479 NA non-coding upstream 368997 10354292 ~ 10366724 (+)
G60575 NA non-coding downstream 6472 10742652 ~ 10742886 (+)
G60577 NA non-coding downstream 34366 10770546 ~ 10770824 (+)
G60607 NA non-coding downstream 76599 10812779 ~ 10852906 (+)
G60608 NA non-coding downstream 78383 10814563 ~ 10840317 (+)
G60620 NA non-coding downstream 165881 10902061 ~ 10905629 (+)
LOC120560959 golga7,LOC104937560,LOC106585131 other upstream 754667 9926950 ~ 9981054 (+)
ppp3cca LOC104934810,LOC100705072,LOC105915415,LOC101486266,LOC102777092,LOC103366803,LOC102200614,LOC101072650,LOC106932221 other upstream 1679956 9017891 ~ 9055765 (+)
vps37ba vps37b,vps37c,LOC102776795 other upstream 1720818 8991441 ~ 9014903 (+)
LOC120560007 NA other upstream 2301049 8431537 ~ 8434672 (+)
LOC120560006 NA other upstream 2307976 8423189 ~ 8427745 (+)
LOC120561144 NA other downstream 11936 10748116 ~ 10752440 (+)
G60897 NA other downstream 1190003 11926183 ~ 11926601 (+)
G61139 tubb2b,tubb4b,LOC103024866,LOC101061694,LOC105901187 other downstream 2184967 12921147 ~ 12923836 (+)
LOC120560904 crb2,LOC103353841,LOC106959700,LOC106929552 other downstream 2395918 13132098 ~ 13180491 (+)
G61337 LOC100705941,LOC102292089,LOC108234925,LOC106529513,LOC104934772,LOC103365846 other downstream 3371303 14107483 ~ 14109546 (+)

Expression


Co-expression Network