LOC120561038 (LOC102778062,LOC101486272,LOC102199534,LOC108245630)


Basic Information

Item Value
gene id LOC120561038
gene name LOC102778062,LOC101486272,LOC102199534,LOC108245630
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 12293707 ~ 12555285 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU81794
CTCCATTTGAGTACATGATCCTGGCCACCATTATTGCCAACTGCATTGTGCTGGCCTTGGAGCAACACCTACCGGCGTCAGACAAAACACCAATGTCAGAGCGTTTGGACGACACAGAGCCCTATTTTATCGGAATATTTTGTTTTGAGGCTGGCATCAAGATCATCGCCCTGGGCTTTGCCTTTCACAAAGGCACCTATCTGCGTAATGGCTGGAATGTAATGGACTTTGTGGTGGTCCTAACAGGACCCTGACTTCCTCCCTTTGTGTGAATTTCCCGCCATTAAGATTTTCTACCCCGCCCCTCATGTATAAATAGTCCTTGTCTCCTTTGTCTTGTGCCAGTTTGTCTTGTTCAGTCTGAATCATAGTCTTTGTcgctgcccgatgtgagtcaaGCGCAGATTTGAGTCGACAAGTAGCctccaagatgctaacggcttttGGAGCTAACGCACAGTctatgagctaacgttagcaatcaaacaatcctAGCTAAAACGTTTCTgaaatgactgctgctgctggctacaagttagcaatcaaacacaacaaaggctgtcacttgaatggccttttgagctaacgttagcaatcaaacaatcgtagatagctaaaatgtttttgaaattatttccatcttctgttattgtatgtaaagagaaacatttattattttatggatttcacaaatttcagtaagacgtTATGcagtaaaccgtttaaatctgggCATGCactctgcactcgactcacatcgggcagtgacgtCTCGTCCAACATCGCAGCCAGGTTTCTGTTACCAGCTTTTGTTTGTAATTATCTGTTCCTCCAAAGTGagagtttttctttgtttgaacttTGACCCTGATTGTGATTGTTGTAGCTCTACCCAGTAAACTACTTTTTTATACCTACTATTGTTTGAGAGTCGTGCATTTGAGTCCACCAGTCTCGTGTCTGAG
>XM_039804005.1
tctcaaggaggatcagaagaaatggacagcatGTGTCAGTTTTGGTTTCTCCAGAAAGATCTGTGCTATCCCGGAATGGCTCGCTTTGAAGACGAACTGTCTAGCCGCTATGGAGGCATGTGTCCCGTGGGCCCGGCCAGAGGGGCCAGCCGGCTGCCGGGGCCTCCGGGGGTCCAGAGGATGTACAAGCAGACGATGGCCCAGAGAGCCAGGACCATGGCTATTTACAACCCCATTCCAGTCAAACACAGCTGCCTCTCCGTTAACCGCTCTCTGTTCATCTTCAGCGAGGATAATATCATACGGAAATATGCCAAAAAGATCACGGAATGGCCTCCATTTGAGTACATGATCCTGGCCACCATTATTGCCAACTGCATTGTGCTGGCCTTGGAGCAACACCTACCGGCGTCAGACAAAACACCAATGTCAGAGCGTTTGGACGACACAGAGCCCTATTTTATCGGAATATTTTGTTTTGAGGCTGGCATCAAGATCATCGCCCTGGGCTTTGCCTTTCACAAAGGCACCTATCTGCGTAATGGCTGGAATGTAATGGACTTTGTGGTGGTCCTAACAGGGATCTTGGCCACTGTGGGGGCGGATTTTGATCTAAGAACACTGAGGGCAGTGAGAGTACTGCGGCCGCTCAAACTGGTCTCTGGCATTCCAAGTCTTCAGGTGGTATTGAAGTCCATTATGAAAGCCATGGTACCTCTGCTGCAGATTGGCTTGCTGCTCTTCTTCGCCATCCTCATGTTTGCCATCATCGGCCTCGACTTCTACATGGGCAAGTTCCATCGCACCTGCTTCAGAATAGACACAGACGAGCAAGCTGCAGATTTCCCCTGTGGCCTGGAGGCTCCGGCAAGGACCTGTGCCAACGGCACTGCCTGCAGGGAGTACTGGATCGGACCCAACTATGGCATCACCAATTTTGACAACATCCTCTTCGCTGTTCTCACTGTTTTCCAGTGCATCACCATGGAGGGATGGGTGGACATTCTCTATAACgccAATGATGCCTCAGGGAACACGTGGAACTGGCTTTACTTCATCCCCCTCATCATCATCGGTTCCTTCTTCATGCTCAACCTGGTGTTAGGTGTGCTGTCAGGGGAGTTTGCCAAGGAGCGAGAGCGGGTGGAGAAGAGGCAAGAATTCCTGAAGCTCCGCAGACAACAGCAAATAGAGAGAGAGTTAACTGGGTACCTGGAGTGGATCTGCAAAGCAGAGGAGGTGATGCTGGCCGAGGAAGACAAGAACGCAGAGGAGAAATCTTTGGATGGAGCGTGgtacaaaaggaaaaacaacaactctgTGCTGAAAAGGACCAAGAAGAGTAAGAATGACCTCATCAATGCAGAGGAAGGCGAAGACCACTTCACTGACATCTCATCTGCTGCCCCCCCAGGGTCGCCGTTCACCCGGGCCAGCTTGAAGAGCAAGAACGAGAACTCGTCTTACTTcaggaggaaagagaagagaatTCGCTTCACCATCCGCCGTCTGGTCAAGTCCCAGAGCTTCTACTGGACTGTTTTGTGTCTGGTTGGCCTCAACACGTTGTGTGTAGCCATAGTACACTATGACCAGCCTGAATGGCTCACCTTTGCATTATACCTGGCCGAGTTTGTATTCCTGGGCCTGTTTCTGGCAGAGATGTCCATGAAAATGTATGGCCTCGGACCCCAGAACTACTTCCACTCCTCATTCAACTGTTTTGACTTTGGTGTGATTATTGGCAGTATTTTTGAGGTGATCTGGGCTGCCATCAAACCCGGGGCCTCATTTGGGATCAGTGTCCTGCGGGCTCTGAGACTGCTCAGGATCTTCAAAGTCACCAAGTACTGGAACTCCTTGAGGAACCTGGTCGTATCCCTTCTCAACTCCATGAAGTCTATTATCAGCCTGTTgttcctccttttcctcttcaTCGTGGTCTTTGCTCTGCTGGGCATGCAGCTCTTTGGTGGCCAATTTAATTTTGAAGATGAAACACCAACAACCAACTTTGACACATTCCCAGCAGCGATTCTCACTGTCTTCCAGATACTAACTGGGGAGGACTGGAACGCAGTCATGTACCATGGGATCGAATCACAGGGGGGCGTTCACAGGGGGATGTTCTCCTCCATTTATTTCATTGTTCTCACTCTCTTTGGAAACTACACACTCCTCAACGTGTTCTTGGCCATTGCTGTCGATAACCTCGCAAATGCCCAGGAGCTCACTAAGGATGAAGAGGAGCAAGAGGTGGCCATCAATAAGAAGCTCGCACTCCAGAAGGCCATGGAGGTAAAGGAGGTCAGCCCCATGTCAGCCACTAACATGTCCATCACAGCTTTTCTAACACGCAGTCGAGGTAACGCGCACTCTAGCAGCTCATCCATCTGCAGCGTTAACTCACTCTCCTCTGTGATCACACCTTCTGGTAGAGCTGCGAGTTATGTCTGCACCCCAGTCCACTACCTGAGTAAGGAGCAGCAGAAGTCAATGAAGACAATGTCGGTGTGGGAGCAGAGGGCCAACCAGCTGAGGAGGCAGAACCAAGCGAGCTGCGAGGCCCTCTACAGTGAGCTGGATCTTGAGGAGCGTCTTCGCCTGTCCTCTGCCCTGAACATCCGGCCTGACATGAAGACCCACCTCGACCGGCCGCTGGTTGTTGAGCCTCGCGACGGGCCTTTGCTGGCCGGCCATCAACACCACCATCACAAGCCCTCCATGCCAGAGGAGGCAGAGACTGCCAATGACCCTCCCCCTCCTGTGCCTCACCAGGCCCGTCGCCACCACCGCCACAGAGACAGGGACCGGGCCAGAACAAGAGAGGGGACGAATGATAACAGTGGCACCAGTAAGGACGGGGGCCACCATGTCCATCACAGCCGCTCCAAAGACCATGACAGCAGCCGGGGCAAAGAGGGGAAGAGCGAGAGGTCCCGAAGCCAAGAAGGAGGCAGGAGACCTCACCATCAGAGCTCAGTTGATGACAGCGGAGGTGGAGGAGCCATGAGCGAGAAAGAGCATCGGCATCATCATTCACACCGACAGTCCAGAGGGGGCAATGGGACAGTGAACAGTGGCGGGAGGGGAGAGCGAAGATCCCGCCACAAAAATGGACGTTCGTCTAACAGGGATGGGGATAGGAATTCCAGAGGAGACAGTGGTGCCAATGGAGAGCGGAGGAGACATCGGACTCATGGATCCAAGGGCCAATCCACAGTTGAAGGAGAGGTGTCCAATGAGAAAGAGAAGAGTCACAGGTTTGGCGACTCAGAGGGTGAGTTCCTCGCCATCTCCCCCCAGCAGGGCTCTGAAGGGGGCAACTGTCCTCCTGACCGACGAGAGGACTCAGACAACCAGAGGAACATCACAAGAACCGGCCAAACCTCCATCCACATTCCTCCTGTGACTATCACTTCCCCACCTGGAGACACCACCCTCATACAAATTAACAGTATTGACGGTGAGACAATGCCCATGAATGAGAAGGCCCTGGCGGATCGAGGTCAAAGTGGACCCAAACCCATTCTGCCTTACAGTTCTATGTTCATCTTCGGACAGACTAATCCgGTGAGGCGGTTATGTCATTACATTGTGACTCTGCGTTATTTTGAGATGTCCATCCTGGTTGTCATTGCTATGAGCAGTATCGCTTTGGCAGCAGAGGACCCTGTCTGGACGAATGCCCCTCGCAACAATGTGCTCAAATATCTGGATTATGCCTTCACTGGCGTTTTCACTTTTGAAATGGTGATCAAGATGGTGGACCTTGGCCTGTTGCTTCATCCTGGAGCCTACTTCAGAGACCTGTGGAACATTCTGGACTTCATAGTGGTCAGTGGGGCGCTGGTGGCTTTTGCATTTTCGAGCTTCATGGGATCGCAACAAGGTGTGACCAGGGGGACCAAAGGCAAAGACATCAGCACTATCAAGTCACTGAGGGTTCTCCGAGTGCTCAGGCCTCTCAAGACCATCAAACGTCTGCCAAAACTCAAGGCGGTGTTCGACTGCGTGGTCAATTCTTTGAAGAACGTGCTGAACATCCTCATTGTTTACATCCTCTTCATGTTCATCTTTGCTGTCATCGCAGTACAGCTCTTCAAGGGAAAATTCTTCTACTGCACAGATGAGTCCAAGGTCCTGCAGAAGGACTGCAAAGGACAATTCCTCTACTACGACAGGGACGAGGTGGCCGCCATGCCCAGAGAGTGGAAGAAATATGAGTTCCATTACGACAATGTGCTGTGGGCCTTCCTGACCCTTTTCACTGTCTCCACTGGGGAGGGCTGGCCAACTGTTTTGAAGCACTCTGTGGATGCTACCTTTGAAGACACAGGTCCTAGTCCAGGCTACCGGATAGAAATGTCCATCTTCTATGTGGTCTACTTTGTGGTCTTCCCTTTCTTTTTTGTCAACATCTTTGTGGCTCTGATCATCATCACCTTCCAGGAGCAGGGAGACAAGGCATTGTCTGAGTGCAGCTTGGAAAAGAATGAGAGGGCTTGTATTGACTTTGCCATAAATGCCAAACCTCTGACACGCTACATGCCCCAGAACATGCAGTCCTTCCAGTACAGGATGTGGAAGTTTGTGGTCTCAGCTCCATTTGAGTACTCCATCATGATCATGATTGCTCTCAATACTGTGGTACTCATGATGAAGTTTCATGGAGCTCCAGACTTTTATGAAACGATGCTGAAGAACCTCAACATAGTCTTCACCACTCTCTTCTCTCTGGAGTGCATCCTCAAGATCATTGCTTTTGGTCCACTGAACTACTTGAAGGATGCTTGGAACGTGTTTGACTTTGTCACAGTGTTGGGCAGCATCACTGACATCCTGGTGACTGAAATCAATACTACGGACAGGCTGCTGAACCTGAGTTTCCTGAGGCTGTTCAGAGCCGCTCGGCTCATCAAGCTGCTGAGACAGGGCTACACCATCCGCATCCTGCTGTGGACCTTCGTCCAGTCCTTTAAGGCCCTGCCTTATGTTTGCCTTCTGATTGCTATGCTGTTCTTCATTTATGCCATCATTGGGATGCAGGTGTTTGGCAACATTGAGATGAATGAAGACACAGCTATCAATCACCACAACAACTTCCGCACTTTCCTCCAAGCTCTCATGCTGCTGTTCAGGAGTGCAACTGGTGAGGCCTGGCACGAGATCATGTTATCATGTTTGAGTCACCGAGCCTGTGACAAGCTATCAGGGTCCGATGGGGAAGAGTGCGGCAGTGATTTCGCGTACTTCTACTTTGTCTCCTTTATCTTCCTCTGCTCCTTCCTGATGCTGAACCTGTTTGTGGCTGTCATAATGGATAACTTTGAGTACCTAACCAGAGACTCCTCCATCCTGGGGCCTCATCACCTCGATGAGTTCATCCGGGTTTGGGCTGAGTACGACCCGGCTGCATGcGCCTCGTCAAAATGAACATGCCCATCGCTGATGACAACAGCGTCCATTTCACCTCCACTCTGATGGCCCTGATTCGCACTGCCCTGGGGATCAAACTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU81794 False 965 lncRNA 0.43 3 12527804 12550209
XM_039804005.1 True 5520 mRNA 0.52 44 12293707 12555285

Neighbor

gene id symbol gene type direction distance location
man1b1b LOC103359688 coding downstream 73350 12158633 ~ 12220357 (-)
noxa1 LOC103359690 coding downstream 177466 12081499 ~ 12116241 (-)
niban2b LOC106585213,LOC107560233,LOC107715759 coding downstream 577759 11641802 ~ 11715948 (-)
npdc1b npdc1 coding downstream 654269 11608619 ~ 11639438 (-)
LOC120561251 NA coding downstream 938801 11351854 ~ 11354906 (-)
ehmt1a NA coding upstream 2282 12557567 ~ 12600992 (-)
arrdc1a LOC103353853,LOC104923796 coding upstream 55131 12610416 ~ 12635123 (-)
LOC120561146 LOC104923795 coding upstream 86570 12641855 ~ 12643156 (-)
nelfb nelfb,LOC102791926 coding upstream 97333 12652618 ~ 12669126 (-)
LOC120561416 entpd2 coding upstream 118412 12673697 ~ 12692346 (-)
G60955 NA non-coding downstream 136355 12144056 ~ 12157352 (-)
G60914 NA non-coding downstream 295429 11998058 ~ 11998278 (-)
G60913 NA non-coding downstream 306838 11986620 ~ 11986869 (-)
G60911 NA non-coding downstream 310596 11982891 ~ 11983111 (-)
G60909 NA non-coding downstream 322222 11971264 ~ 11971485 (-)
G61051 NA non-coding upstream 48520 12603805 ~ 12604426 (-)
G61083 NA non-coding upstream 88761 12644046 ~ 12644532 (-)
G61084 NA non-coding upstream 89443 12644728 ~ 12644952 (-)
G61085 NA non-coding upstream 91081 12646366 ~ 12646567 (-)
G61124 NA non-coding upstream 231678 12786963 ~ 12788320 (-)
LOC120561001 whrn,LOC102797690 other downstream 232061 11901650 ~ 12061646 (-)
abca2 abca2 other downstream 700047 11285385 ~ 11593660 (-)
G60715 NA other downstream 1103966 11189142 ~ 11189741 (-)
unc5db unc5d other downstream 1774740 10122152 ~ 10518967 (-)
tacr1a tacr1,LOC102799894,LOC100703444,LOC102196095 other downstream 3566264 8643403 ~ 8727443 (-)
G61264 NA other upstream 1033754 13589039 ~ 13589332 (-)
si:ch73-138n13.1 LOC102794857,LOC107084631 other upstream 1772866 14328151 ~ 14364326 (-)
trnaa-agc_14 NA other upstream 2383690 14938975 ~ 14939047 (-)
trnaa-agc_15 NA other upstream 2389211 14944496 ~ 14944568 (-)
trnae-cuc_15 NA other upstream 2393474 14948759 ~ 14948830 (-)

Expression


Co-expression Network