G61192


Basic Information

Item Value
gene id G61192
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 13181582 ~ 13182308 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU82004
taaacaccgagcataaacacagccgtgaattagtgtgtaatgtagaatggtcggcatttaacagtcacaaactccaccagcagttagcagttaaatggatacaaatcaccacatttctgcaccactcggtgttaacacagcccacctcttttacccggcgacagagcatctctagctcggagggctagcaggcttggtagctggacagtccggtacactattcaggcatgtttccacaacaaaaacacaaagtctctgaactcacgttgggagtgtcgttgaagttggatgtagtccagtttgtggtctaaatgagcggacacttgcaagcaggatccgtaagttcagctaacgcatactagcattggtgtagctaaacacggagtataaacacagcgtgaattagcgtggaatgtcgaatggtcggcatttaacagtcacaagctccatcagcagttagcagtagctagttggattttatttctacaccagtccacctccacgggccggtgagagcagcctggtagctggatagtcccggttccggtacactgttgttcaggcatgtttccacaacaacaaaaacacagcagtcactgaactcacgttgggagtttcgttgtaggaggatgtagtccagcttgttgtttaatgagcagacacttgcaagcaggat
>TU82005
taaacaccgagcataaacacagccgtgaattagtgtgtaatgtagaatggtcggcatttaacagtcacaaactccaccagcagttagcagttaaatggatacaaatcaccacatttctgcaccactcggtgttaacacagcccacctcttttacccggcgacagagcatctctagctcggagggctagcaggcttggtagctggacagtccggtacactattcaggcatgtttccacaacaaaaacacaaagtctctgaactcacgttgggagtgtcgttgaagttggatgtagtccagtttgtggtctaaatgagcggacacttgcaagcaggatccgtaagttcagctaacgcatactagcattggtgtagctaaacacggagtataaacacagcgtgaattagcgtggaatgtcgaatggtcggcatttaacagtcacaagctccatcagcagttagcagtagctagttggattttatttctacaccagtccacctccacgggccggtgagagcagcctggtagctggatagtcccggttccggtacactgttgttcaggcatgtttccacaacaacaaaaacacagcagtcactgaactcacgttgggagtttcgttgtaggaggatgtagtccagcttgttgtttaatgagcagacacttgcaagcaggatggctgggacaggtggacagctagcgttagctttccacctagccgatgagga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82004 False 676 lncRNA 0.47 1 13181582 13182257
TU82005 True 727 lncRNA 0.48 1 13181582 13182308

Neighbor

gene id symbol gene type direction distance location
bcl2l16 LOC103353844,LOC104923787,LOC108246437,LOC104963815 coding upstream 248583 12909814 ~ 12932999 (+)
si:dkey-90l8.3 LOC104923788,LOC103353846 coding upstream 316330 12860590 ~ 12865252 (+)
ccn1l2 LOC104943830 coding upstream 343675 12831272 ~ 12837907 (+)
fkbp15b NA coding upstream 387151 12752510 ~ 12794431 (+)
fgf17 fgf17,LOC100689794 coding upstream 433046 12740866 ~ 12748536 (+)
lhx2b lhx2 coding downstream 166833 13349141 ~ 13366210 (+)
adgrd2 NA coding downstream 385251 13567559 ~ 13646350 (+)
LOC120561313 olfml2a coding downstream 687374 13869682 ~ 13902649 (+)
LOC120559997 NA coding downstream 762730 13945038 ~ 13961157 (+)
atad1a atad1,LOC101479261,LOC100705680,LOC104934768,LOC102292399,LOC106527948 coding downstream 803923 13986231 ~ 14000271 (+)
G61160 NA non-coding upstream 181695 12999459 ~ 12999887 (+)
G61091 NA non-coding upstream 499514 12679709 ~ 12682068 (+)
G61067 NA non-coding upstream 542722 12638608 ~ 12638860 (+)
G61053 NA non-coding upstream 572124 12609104 ~ 12609458 (+)
G61052 NA non-coding upstream 573525 12607644 ~ 12608057 (+)
G61194 NA non-coding downstream 311 13182619 ~ 13184450 (+)
G61232 NA non-coding downstream 242443 13424751 ~ 13424951 (+)
G61244 nr5a1,LOC101062876 non-coding downstream 464989 13647297 ~ 13651464 (+)
G61254 NA non-coding downstream 496959 13679267 ~ 13679593 (+)
G61255 nr5a1,LOC102788368 non-coding downstream 497905 13680213 ~ 13680865 (+)
LOC120560904 crb2,LOC103353841,LOC106959700,LOC106929552 other upstream 1091 13132098 ~ 13180491 (+)
G61139 tubb2b,tubb4b,LOC103024866,LOC101061694,LOC105901187 other upstream 257746 12921147 ~ 12923836 (+)
G60897 NA other upstream 1254981 11926183 ~ 11926601 (+)
LOC120561144 NA other upstream 2429142 10748116 ~ 10752440 (+)
LOC120561142 NA other upstream 2434629 10726438 ~ 10746953 (+)
G61337 LOC100705941,LOC102292089,LOC108234925,LOC106529513,LOC104934772,LOC103365846 other downstream 925175 14107483 ~ 14109546 (+)
G61338 htr7,LOC104934772,LOC101065316 other downstream 959134 14141442 ~ 14142050 (+)
LOC120560400 tmem150a,LOC106585116 other downstream 1069948 14252256 ~ 14281771 (+)
G61383 NA other downstream 1101109 14283417 ~ 14283871 (+)
G61390 crybb2,LOC108234953,LOC100703162 other downstream 1135231 14317539 ~ 14319506 (+)

Expression


Co-expression Network