G61448


Basic Information

Item Value
gene id G61448
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 14401231 ~ 14401881 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU82318
TGGAACTGCTAGCTAACAACTCAAAGACATCTGAGATGTGACAAGAGGCCCCAGCTAGACGCTGCGTTTTTTTTACAaggggtcacaagccaaaaaaaaaGGTCGGGAACCACTAGTTTGATATTTAACAATGTATTATATTTCATAAGCATTTCATACACTAAATTTAACACTAAAATTGTCACCTGCAAGGTAACTAGTAACCAGCAGTCAAGTGAATGTAGTAGagataaaagtgtttttttaaagtataaagtagaatAAAATGGTTACAAGTTACAAGTACGAGTACATCAAAATTGCACTCGactacagtacttgagtaaatgtactcagttatattccaccactggtaacATGTATGTTTACATATGACATCATATACATTTCTATGGTTTACTATTCTCACTTTGTATATAAatcttttgtactttttcattttccttGTCAAGCACTTTGTAATCTCTGGTTTTGATAGGGGCCACATAAATAAGCGACTGTTATCACCACTATGGTATTATTTTACGGTCCATCTGCTCACCTGTTGACATTTCAACTTTCTGATGTCTAAATAAGTCACAAGACACAGTCTTAATGTCACCGAATGCAaacataaatgtacattttgtgcAGTTGATGTTGGTTATTGTT

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU82318 True 651 lncRNA 0.34 1 14401231 14401881

Neighbor

gene id symbol gene type direction distance location
unc119.1 unc119b coding upstream 18004 14377254 ~ 14383227 (+)
idua idua coding upstream 154926 14234278 ~ 14246305 (+)
LOC120560659 LOC103369208,LOC102291259,LOC102215744,LOC101478239 coding upstream 167843 14212239 ~ 14233388 (+)
LOC120560074 NA coding upstream 189527 14198755 ~ 14211704 (+)
piwil2 piwil2 coding upstream 212314 14147570 ~ 14188917 (+)
msi1b msi1,LOC100704609 coding downstream 3259 14405140 ~ 14429432 (+)
prkab1b LOC103353610,LOC101165238 coding downstream 35944 14437825 ~ 14445152 (+)
pla2g1b NA coding downstream 48970 14450851 ~ 14454246 (+)
cfap77 NA coding downstream 146798 14548679 ~ 14555480 (+)
barhl1a NA coding downstream 154508 14556389 ~ 14563699 (+)
G61431 rnf10,LOC102784202 non-coding upstream 32743 14365232 ~ 14368488 (+)
G61391 NA non-coding upstream 71484 14328180 ~ 14329747 (+)
G61389 crybb3,LOC103469711 non-coding upstream 73698 14325390 ~ 14327533 (+)
G61376 NA non-coding upstream 138362 14262155 ~ 14262869 (+)
G61332 NA non-coding upstream 340060 14060922 ~ 14061171 (+)
G61449 NA non-coding downstream 174 14402055 ~ 14402762 (+)
G61450 NA non-coding downstream 1752 14403633 ~ 14404172 (+)
LOC120561034 NA non-coding downstream 63122 14465003 ~ 14465725 (+)
LOC120561032 NA non-coding downstream 67316 14469197 ~ 14472189 (+)
LOC120560938 NA non-coding downstream 95900 14497781 ~ 14499057 (+)
c6h12orf43 NA other upstream 8648 14389471 ~ 14392583 (+)
G61390 crybb2,LOC108234953,LOC100703162 other upstream 81725 14317539 ~ 14319506 (+)
G61383 NA other upstream 117360 14283417 ~ 14283871 (+)
LOC120560400 tmem150a,LOC106585116 other upstream 119460 14252256 ~ 14281771 (+)
G61338 htr7,LOC104934772,LOC101065316 other upstream 259181 14141442 ~ 14142050 (+)
LOC120560925 NA other downstream 29449 14431330 ~ 14434597 (+)
G61514 surf4,LOC103397973,LOC102307728,LOC100699423,LOC101479701,LOC101465012 other downstream 297644 14699525 ~ 14794602 (+)
LOC120561401 NA other downstream 353569 14755450 ~ 14762549 (+)
surf4l surf4,LOC103397973,LOC102307728,LOC100699423,LOC101479701,LOC101465012 other downstream 372632 14774513 ~ 14795943 (+)
cntrl NA other downstream 526492 14928373 ~ 14979797 (+)

Expression


Co-expression Network