G61449


Basic Information

Item Value
gene id G61449
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 14402055 ~ 14402762 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU82319
catgaaccctaaccataacttgtcatgacaaaaaccgaatgacacttaactaaaagaagcgttatgtcataaacgtttatgacttgtttgtttgtgacacgttcatgacagtgtcatgtcactcttatgtagagaCCTTCatgtaaagtgtaaccaaacttTCTACTTGAACTGTTCATGGACTTCTCTGATTTCCAAATTCAAGATTCCTCCGCCTTTGATCCACcctcttgtttttttgtcaaagaaAGTTGGCAGGAATGATAAGTTGGAAGTGGACTGTGAAGGAAAGAGGGCCAACTGAATGGGAGAAAACCTTTGAGCGTTAATGTAGTCCTTTatcttttccctctctttcaGCGTAAAACGCTCACTTTCTCTGCCTGGATCACCTTATACCATTCTCAGGTTCAGCCTATCAGCACCTTTTTGTGTAGAGCTCTTGTTACCCCACCCCACCCTTGGGAAGATGGCATTATACTGTATTTGGAAGGGTAACAGAGCTCCCTCTATCTCCCTGAGACATGCCACTGACCTGTAATTAAGTCCCATTGTACTATTCAGAGGAAACTCCTCACCAAAACGGACAGAGGGCAATGTGTGTGGATTTCCAACAGCTCAGATACCGCTGTGACTAATGCTCCACCACACAGGCTGGGTTTATCAAAATGGACCACATGCAGCACACATTAGGGCTTGCATTTTCCC

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko04950 Maturity onset diabetes of the young

RNA

RNA id representative length rna type GC content exon number start site end site
TU82319 True 708 lncRNA 0.43 1 14402055 14402762

Neighbor

gene id symbol gene type direction distance location
unc119.1 unc119b coding upstream 18828 14377254 ~ 14383227 (+)
idua idua coding upstream 155750 14234278 ~ 14246305 (+)
LOC120560659 LOC103369208,LOC102291259,LOC102215744,LOC101478239 coding upstream 168667 14212239 ~ 14233388 (+)
LOC120560074 NA coding upstream 190351 14198755 ~ 14211704 (+)
piwil2 piwil2 coding upstream 213138 14147570 ~ 14188917 (+)
msi1b msi1,LOC100704609 coding downstream 2378 14405140 ~ 14429432 (+)
prkab1b LOC103353610,LOC101165238 coding downstream 35063 14437825 ~ 14445152 (+)
pla2g1b NA coding downstream 48089 14450851 ~ 14454246 (+)
cfap77 NA coding downstream 145917 14548679 ~ 14555480 (+)
barhl1a NA coding downstream 153627 14556389 ~ 14563699 (+)
G61448 NA non-coding upstream 174 14401231 ~ 14401881 (+)
G61431 rnf10,LOC102784202 non-coding upstream 33567 14365232 ~ 14368488 (+)
G61391 NA non-coding upstream 72308 14328180 ~ 14329747 (+)
G61389 crybb3,LOC103469711 non-coding upstream 74522 14325390 ~ 14327533 (+)
G61376 NA non-coding upstream 139186 14262155 ~ 14262869 (+)
G61450 NA non-coding downstream 871 14403633 ~ 14404172 (+)
LOC120561034 NA non-coding downstream 62241 14465003 ~ 14465725 (+)
LOC120561032 NA non-coding downstream 66435 14469197 ~ 14472189 (+)
LOC120560938 NA non-coding downstream 95019 14497781 ~ 14499057 (+)
G61468 NA non-coding downstream 96418 14499180 ~ 14499434 (+)
c6h12orf43 NA other upstream 9472 14389471 ~ 14392583 (+)
G61390 crybb2,LOC108234953,LOC100703162 other upstream 82549 14317539 ~ 14319506 (+)
G61383 NA other upstream 118184 14283417 ~ 14283871 (+)
LOC120560400 tmem150a,LOC106585116 other upstream 120284 14252256 ~ 14281771 (+)
G61338 htr7,LOC104934772,LOC101065316 other upstream 260005 14141442 ~ 14142050 (+)
LOC120560925 NA other downstream 28568 14431330 ~ 14434597 (+)
G61514 surf4,LOC103397973,LOC102307728,LOC100699423,LOC101479701,LOC101465012 other downstream 296763 14699525 ~ 14794602 (+)
LOC120561401 NA other downstream 352688 14755450 ~ 14762549 (+)
surf4l surf4,LOC103397973,LOC102307728,LOC100699423,LOC101479701,LOC101465012 other downstream 371751 14774513 ~ 14795943 (+)
cntrl NA other downstream 525611 14928373 ~ 14979797 (+)

Expression


Co-expression Network