G61450


Basic Information

Item Value
gene id G61450
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 14403633 ~ 14404172 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU82320
GTGAGATGACAAATACAACAAAGTAATTATTATGTAACAAACCATAAGTTGCCATTCAAGCACCTCAGACACATTATAGGAGCCTGTGAGTATATTAAAGGAGCAGTATGACTTCATGTTTACCTAATATTATTCAAGTCTGCTACATTGATAAGTAATTTCTCAGCCAACTGTTGGCTGATTCACTTTGTGGCTTCACTTTTCCATTAACACTGTAAGGACAACACAAAATGTACAGAGCAGACTACAACACGGcctgttgtgagtaaaagtcgtgtctgtaatatatttttactaaattGAATTAATAGCACATGATATTAATTTCCTGGCAATACAAATACCACTTTCATTCACATGTGGTTTGTCATAATATGTCATAGATTTTTGCAAGACTTTCACTGtaattttacctttttttcaaAGACCTTTCAAAACGGATTATATTACAAATGAACATTAGTTCTCGTAACTGTAAATTGTGCCTGTTAACACTGTATCCAAACTAGAACGGGAATTGCCTCAAATGAATCGAAGTTA

Function

GO: NA

KEGG:

id description
ko00830 Retinol metabolism
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
TU82320 True 540 lncRNA 0.34 1 14403633 14404172

Neighbor

gene id symbol gene type direction distance location
unc119.1 unc119b coding upstream 20406 14377254 ~ 14383227 (+)
idua idua coding upstream 157328 14234278 ~ 14246305 (+)
LOC120560659 LOC103369208,LOC102291259,LOC102215744,LOC101478239 coding upstream 170245 14212239 ~ 14233388 (+)
LOC120560074 NA coding upstream 191929 14198755 ~ 14211704 (+)
piwil2 piwil2 coding upstream 214716 14147570 ~ 14188917 (+)
msi1b msi1,LOC100704609 coding downstream 968 14405140 ~ 14429432 (+)
prkab1b LOC103353610,LOC101165238 coding downstream 33653 14437825 ~ 14445152 (+)
pla2g1b NA coding downstream 46679 14450851 ~ 14454246 (+)
cfap77 NA coding downstream 144507 14548679 ~ 14555480 (+)
barhl1a NA coding downstream 152217 14556389 ~ 14563699 (+)
G61449 NA non-coding upstream 871 14402055 ~ 14402762 (+)
G61448 NA non-coding upstream 1752 14401231 ~ 14401881 (+)
G61431 rnf10,LOC102784202 non-coding upstream 35145 14365232 ~ 14368488 (+)
G61391 NA non-coding upstream 73886 14328180 ~ 14329747 (+)
G61389 crybb3,LOC103469711 non-coding upstream 76100 14325390 ~ 14327533 (+)
LOC120561034 NA non-coding downstream 60831 14465003 ~ 14465725 (+)
LOC120561032 NA non-coding downstream 65025 14469197 ~ 14472189 (+)
LOC120560938 NA non-coding downstream 93609 14497781 ~ 14499057 (+)
G61468 NA non-coding downstream 95008 14499180 ~ 14499434 (+)
G61513 NA non-coding downstream 271965 14676137 ~ 14677372 (+)
c6h12orf43 NA other upstream 11050 14389471 ~ 14392583 (+)
G61390 crybb2,LOC108234953,LOC100703162 other upstream 84127 14317539 ~ 14319506 (+)
G61383 NA other upstream 119762 14283417 ~ 14283871 (+)
LOC120560400 tmem150a,LOC106585116 other upstream 121862 14252256 ~ 14281771 (+)
G61338 htr7,LOC104934772,LOC101065316 other upstream 261583 14141442 ~ 14142050 (+)
LOC120560925 NA other downstream 27158 14431330 ~ 14434597 (+)
G61514 surf4,LOC103397973,LOC102307728,LOC100699423,LOC101479701,LOC101465012 other downstream 295353 14699525 ~ 14794602 (+)
LOC120561401 NA other downstream 351278 14755450 ~ 14762549 (+)
surf4l surf4,LOC103397973,LOC102307728,LOC100699423,LOC101479701,LOC101465012 other downstream 370341 14774513 ~ 14795943 (+)
cntrl NA other downstream 524201 14928373 ~ 14979797 (+)

Expression


Co-expression Network