G61539


Basic Information

Item Value
gene id G61539
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 15026441 ~ 15027400 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU82458
CACAGTATTGAAATTATCTTTATTGGTTTTTTGCACAGGTTTCCCAGCAATATTTATATTGTAAAAATGTTAATTGTTAATCATACACACTAACATCAGGAAGATTAGACACACAGAGGTTGTGATAACTgggttaagagtttaggaaagttgttaaaagtatttaaaaaattgtcatggtgatcgtaaaaaactgtaaaaaacaacactgtactcttacacacacacacacacacacacagacacagacagacagacacacacagacgcacacaaacacacaaacacacacaagcatgcagacaaacaaacacacacacaagcacaaacacaaacacacacacaatgagaagactatatgagacgtgcaataatacagtcaaagatattttacattttcaaattaaaagcatGTCTCCCAGCCAGATAATGCTTAGTCACAGCTAGTATATATATCACCAAACATGTCCTCTATTTCTCTCTGGCTCCAACCAGCTGATGAGGAACACAGGGTCACAGTTCTCACACCCAATGCTAAAACTAATAAGAATGGAGAGAATTTAAAGCAAAAAGGTTACATGTTGACAACAAATGAAGAGAAAAACACCATTTATAACCATGAAAGAAACCAAATCAACATACTGCATTTACTCAAGGAACTGAATGctgaatataaaaaatacaaaagacactTTTAcccaaaataaagaaacacagcGAATGTTAAGGCAGCGTACCATGGAGACGCCACATGCAGACTGTATAAAACCAGACAGTTAACAGTACAAAATCAACTTGattataatataaaatgtaaatttaaatgaaaacacagtGAAGTCATTGGGCTATCAATCATTTCTATTACTGCTAAAACAATCCTTTTaaaaccatgtgtgtgtgtttgtgtgtgtctgtgtgtgtgtgtgtctctgtgtgtgtgtctttgtgtgtgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82458 True 960 lncRNA 0.35 1 15026441 15027400

Neighbor

gene id symbol gene type direction distance location
LOC120560530 NA coding upstream 44824 14979874 ~ 14981617 (+)
c5 NA coding upstream 101504 14891572 ~ 14924937 (+)
prdm12b LOC102306279,LOC102776562,LOC102208027,LOC101478941 coding upstream 139987 14878628 ~ 14886454 (+)
LOC120560087 LOC103371518 coding upstream 158786 14842071 ~ 14867655 (+)
kazald3 kazald1,LOC107097908 coding upstream 254289 14767716 ~ 14772152 (+)
lrrc2 LOC102210414 coding downstream 215450 15242850 ~ 15252339 (+)
mak16 mak16 coding downstream 271000 15298400 ~ 15306100 (+)
LOC120561495 NA coding downstream 271142 15298542 ~ 15298643 (+)
LOC120560841 ppp2cb,LOC100710281,LOC105920955,LOC101157601,LOC103131405 coding downstream 389056 15416456 ~ 15430582 (+)
LOC120560844 LOC104935222,LOC101481450,LOC102294942,LOC106534038,LOC108245882,LOC100710015,LOC107386134 coding downstream 408341 15435741 ~ 15467408 (+)
G61513 NA non-coding upstream 349069 14676137 ~ 14677372 (+)
G61468 NA non-coding upstream 527007 14499180 ~ 14499434 (+)
LOC120560938 NA non-coding upstream 527384 14497781 ~ 14499057 (+)
LOC120561032 NA non-coding upstream 554252 14469197 ~ 14472189 (+)
LOC120561034 NA non-coding upstream 560716 14465003 ~ 14465725 (+)
G61540 NA non-coding downstream 205 15027605 ~ 15027818 (+)
G61730 LOC102301232,LOC102776762,LOC101476977 non-coding downstream 118700 15146100 ~ 15152551 (+)
G61756 NA non-coding downstream 196714 15224114 ~ 15224465 (+)
G61754 NA non-coding downstream 197147 15224547 ~ 15224969 (+)
G61757 NA non-coding downstream 213016 15240416 ~ 15241442 (+)
cntrl NA other upstream 46644 14928373 ~ 14979797 (+)
surf4l surf4,LOC103397973,LOC102307728,LOC100699423,LOC101479701,LOC101465012 other upstream 230498 14774513 ~ 14795943 (+)
G61514 surf4,LOC103397973,LOC102307728,LOC100699423,LOC101479701,LOC101465012 other upstream 231839 14699525 ~ 14794602 (+)
LOC120561401 NA other upstream 263892 14755450 ~ 14762549 (+)
LOC120560925 NA other upstream 591844 14431330 ~ 14434597 (+)
G61535 LOC103368073 other downstream 51474 15078874 ~ 15083448 (+)
nudt18 nudt18,LOC104957221 other downstream 191737 15219137 ~ 15224015 (+)
spinb spin1,LOC103373448,LOC108245887,LOC101477468,LOC100698355,LOC106527790 other downstream 222344 15249744 ~ 15352625 (+)
zgc:101664 NA other downstream 404308 15431708 ~ 15434935 (+)
LOC120560526 NA other downstream 491380 15518780 ~ 15532796 (+)

Expression


Co-expression Network