LOC120559984


Basic Information

Item Value
gene id LOC120559984
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 15013533 ~ 15017816 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU82656
gaaaagaagaagaccaAACATCAAACCGTCATGGCGTTACTAACCTTCATACAGAGTTTGGAAATCAACGATCATGATCTGCAGATGAAATTCGGCAAAAAAATTGTTGTCGTGTCATTCGTTGACCCGACGATGAATTATAAAAGTTACAGTTTACTAGAAATTGTTTACCGTTTACTTAAATCTGTTCGGATCAATGGGGAAATGCTCGGCCGTGTTCTTTTAAAGAAGCTGCTCTCCTTGCTGTATAGAGCCGGTCTGTGGCTAAAGAGGAAATTTCACTGTTTCATACCGAGAGATAAACGGTATCGCAGCCTACACCTTACTACGGAACTACGACATCTCATCGCAAATACCTGCAACGGTGTAGCAGCTGTTCAACCCATTACAAACGAGTTGAAGCGGCGTTACAAACGGGTTGAAGCGGCGTTGCAAACGAGTTGGAGCGGCGTTGCAAACGAGTTGGAGCGGCGTTGCAAACGACACAACTAATCTAAACCGACCTGCTATCCGGGAAAACACCATGCCAAGATAACGCTAACGGGTCCACGGCACAAGCGACGCTTTAATTCTGGTTTATTAATTGTGTCTAAAtgtcaaataaacaaaaaaatactcaATAAGTCACGTGTCGTTTGATATTTCTCTCAGTTGTTAACCCTGCTGTAATGTGTACATCCTATGGTCATTTCACATGTAAAATAGGTGCATCACACTGCTTTTTTTGTTGAAGAACAGTTGCGTCTTTTcgtttcactttttttcactCAAGGCGTTCACGGCGCTCTGAAACTCAAAAGCAAAATGCTTCACTCTCACTGATAATCATAACAAAAAGTTGCCCCAGGCTGCTAAAACAAGCCCTGTCTGAACTTTAAACACGCCATAACTGTGTTGGTGAGTTGGTGACTGTGTGAGCGGTGTGACGATGGCTGTCTCCAGTGTCTTACAGGAAATGTTTGGATCCAAACGCAGAGGAGGACATGAGAAGACAAATGAAAAGGATGCTGATGAAGACTCTGTCGCAAGATCTTGCTGTGCAAGGAGGAAAATCTACAACATCAATACTAATGGGTCAGAGGGCCCTGACAACATCAGTGTGGTGGTAGATGGTTCTACCATTGTTAAGGTTAGACTGTTGGGGGACTTCctacactgagctcctctctctctctctctctctctctctctctctctctctctctctctctccatctgtgtgcattcatgtcccagtgatgcttgttactaacctatcTCCGGGGAGATtgttccccggagtccttatgttttatCTCCTCACAGATTTCTCTGGATTGGGGTGGCACCTTAACCGTTGTTGCcgctgccgtggtcctgctctacGCCCTGAAGTCTTatttctgtatctctctctctctctctctctctctctctctctctctcccaccaaCCGGCAGCGTCAGATGGCCGCCCCCCCCAAAGAGTCtggttctgtctgaggtttctgcctgttgaaAGGAAGTTTTTTCTCACCACtgttgctcttggggggaattgttgggtctctgtcaatcacagagtgtggtctagacctactctatctgtaaagggtCCGTCTGTGATTtgacaaataaaactgaattgaatccCAATGTCCTGTCAGACCATATTTACACTTTCCACACACTCATCCTAAACCAC
>XR_005639397.1
TCCGCCCTGATCTCATCCCATTTCTTTGTcgtccaatcagagagcaggctaaaagcaataaaacacagataccaAAAAGCTGTCCTCATTAATCTGCagcaaagaaaagaagaagaccaAACATCAAACCGTCATGGCGTTACTAACCTTCATACAGAGTTTGGAAATCAACGATCATGATCTGCAGATGAAATTCGGCAAAAAAATTGTTGTCGTGTCATTCGTTGACCCGACGATGAATTATAAAAGTTACAGTTTACTAGAAATTGTTTACCGTTTACTTAAATCTGTTCGGATCAATGGGGAAATGCTCGGCCGTGTTCTTTTAAAGAAGCTGCTCTCCTTGCTGTATAGAGCCGGTCTGTGGCTAAAGAGGAAATTTCACTGTTTCATACCGAGAGATAAACGGTATCGCAGCCTACACCTTACTACGGAACTACGACATCTCATCGCAAATACCTGCAACGGTGTAGCAGCTGTTCAACCCATTACAAACGAGTTGAAGCGGCGTTACAAACGGGTTGAAGCGGCGTTGCAAACGAGTTGGAGCGGCGTTGCAAACGAGTTGGAGCGGCGTTGCAAACGACACAACTAATCTAAACCGACCTGCTATCCGGGAAAACACCATGCCAAGATAACGCTAACGGGTCCACGGCACAAGCGACGCTTTAATTCTGGTTTATTAATTGTGTCTAAAtgtcaaataaacaaaaaaatactcaATAAGTCACGTGTCGTTTGATATTTCTCTCAGTTGTTAACCCTGCTGTAATGTGTACATCCTATGGTCATTTCACATGTAAAATAGGTGCATCACACTGCTTTTTTTGTTGAAGAACAGTTGCGTCTTTTcgtttcactttttttcactCAAGGCGTTCACGGCGCTCTGAAACTCAAAAGCAAAATGCTTCACTCTCACTGATAATCATAACAAAAAGTTGCCCCAGGCTGCTAAAACAAGCCCTGTCTGAACTTTAAACACGCCATAACTGTGTTGGTGAGTTGGTGACTGTGTGAGCGGTGTGACGATGGCTGTCTCCAGTGTCTTACAGGAAATGTTTGGATCCAAACGCAGAGGAGGACATGAGAAGACAAATGAAAAGGATGCTGATGAAGACTCTGTCGCAAGATCTTGCTGTGCAAGGAGGAAAATCTACAACATCAATACTAATGGGTCAGAGGGCCCTGACAACATCAGTGTGGTGGTAGATGGTTCTACCATTGTTAAGGTTAGACTGTTGGGGGACTTCctacactgagctcctctctctctctctctctctctctctctctctctctctctctctctctccatctgtgtgcattcatgtcccagtgatgcttgttactaacctatcTCCGGGGAGATtgttccccggagtccttatgttttatCTCCTCACAGATTTCTCTGGATTGGGGTGGCACCTTAACCGTTGTTGCcgctgccgtggtcctgctctacGCCCTGAAGTCTTatttctgtatctctctctctctctctctctctctctctctctctctcccaccaaCCGGCAGCGTCAGATGGCCGCCCCCCCCAAAGAGTCtggttctgtctgaggtttctgcctgttgaaAGGAAGTTTTTTCTCACCACtgttgctcttggggggaattgttgggtctctgtcaatcacagagtgtggtctagacctactctatctgtaaagggtCCGTCTGTGATTtgacaaataaaact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82656 False 1683 TUCP 0.45 3 15013533 15017713
XR_005639397.1 True 1723 lncRNA 0.45 3 15013596 15017816

Neighbor

gene id symbol gene type direction distance location
LOC120560533 NA coding downstream 22388 14989147 ~ 14991145 (-)
tsc1a tsc1 coding downstream 388336 14600261 ~ 14625197 (-)
ak8 NA coding downstream 414391 14582084 ~ 14599142 (-)
ddx31 ddx31,LOC102778005 coding downstream 433370 14566031 ~ 14580163 (-)
qsox2 qsox2,LOC102781541 coding downstream 465670 14535268 ~ 14547863 (-)
LOC120560022 slc18a1,LOC100703472,LOC106527823 coding upstream 28066 15045882 ~ 15064841 (-)
ppiaa LOC107103142,LOC106904245,LOC103470758,LOC106953379,LOC103129635 coding upstream 52451 15070267 ~ 15076395 (-)
LOC120560949 LOC103368073,LOC103397982 coding upstream 61069 15078885 ~ 15104108 (-)
ogdha LOC103368074,LOC101476977,LOC103397981 coding upstream 91200 15109016 ~ 15152609 (-)
adam9 adam9 coding upstream 140565 15158381 ~ 15199350 (-)
G61699 NA non-coding downstream 19753 14993477 ~ 14993780 (-)
LOC120560531 NA non-coding downstream 28348 14983467 ~ 14985185 (-)
G61695 NA non-coding downstream 47748 14965307 ~ 14965785 (-)
G61631 NA non-coding downstream 145876 14802564 ~ 14867657 (-)
G61647 NA non-coding downstream 214384 14798920 ~ 14799149 (-)
G61706 NA non-coding upstream 8703 15026519 ~ 15027395 (-)
G61711 NA non-coding upstream 50726 15068542 ~ 15068893 (-)
G61740 NA non-coding upstream 88449 15106265 ~ 15129963 (-)
G61742 NA non-coding upstream 135178 15152994 ~ 15180419 (-)
G61813 mak16 non-coding upstream 285913 15303729 ~ 15306067 (-)
trnas-gcu_3 NA other downstream 44956 14968496 ~ 14968577 (-)
trnas-gcu_2 NA other downstream 45373 14968079 ~ 14968160 (-)
trnas-gcu_1 NA other downstream 45773 14967679 ~ 14967760 (-)
trnas-gcu NA other downstream 61950 14951502 ~ 14951583 (-)
trnae-cuc_15 NA other downstream 64703 14948759 ~ 14948830 (-)
tti2 tti2 other upstream 12060 15029876 ~ 15041380 (-)
sdhaf1 sdhaf1,LOC102800057 other upstream 198734 15216550 ~ 15218422 (-)
LOC120560831 NA other upstream 207154 15224970 ~ 15232693 (-)
mfsd14bb LOC103398013,LOC102210719 other upstream 234799 15252615 ~ 15278184 (-)
LOC120560838 NA other upstream 351210 15369026 ~ 15402324 (-)

Expression


Co-expression Network