G61740


Basic Information

Item Value
gene id G61740
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 15106265 ~ 15129963 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU82713
attaaaacaacacagaatacagtatactacactgtatttatttaaagctatagtgtgtagtttttgtctcccccatgaggaattctaagtaatgacaacaaaactgttggcgcatccacgtgatacaagccttacgttATCACGCAttacccccacccctcctccacgcagtttcTAGTAGCTAAGGAGGACACATTGCTTGATTTCCTGCGCGCAAACGTCGCCAGACGACACtagtttctgaacatagtcatactgagaaatacagagagagttgtgtggagctgatagtctgaATTAGCtttgtaacggacgttcattaatataaaaaagttacgcagtAAAGCTTTAATATGGATCAGTGACATCATGGGCGATATCATATCATGGCCCTATatcatcaatatcacttccGATACCAATCAGTGCATCCCTAAATTGAACATGTGCTGGTAAATGGAAATGTCTCTGCAGCAGGAATATAAGAACTGATGTATTGATAACTAACCTGAACAAAGAAAATCTAATTTTATTTTACCGGGAAAGCTTCGACAAGTTTTAAAAGTCTCCTAGCTGAGACAGACAGCAAGTTCTAGGCAATCAAGATCACAAAATAATTTCTAATACAACTATATAAAAGATTTCATCCTAAAACAACTGAAATTGCACCTTAAAACAACCCAGGAGCTGATACCTCTGATGTACTCATAACATAATGAGACAAACACATGATGATTCTAAAATACCCCAAAACTTTTTTCTTCAACCAGAGGGAGAGTGCACAAAGTTTTCAATTCAACAGGCTCACTGTTCTTTACTCCTGTGGAAAGATTGTGTTTATTTGATGATATCAGACAGTGAACCacagtgaaatatccctttaatgcCTCAGTGCACAGGAAACATTCAGAGGAAATTCACAcaattttcaaaaatataaaccGTTAAATGTACAACATGAAGAATTTTTGCTGCTTTTTTCCCTTCTATTTTTTTCATCTCCCCAAAATATCCAAATAGAGTATAGCTGTATAGTGTAGCTTTTGGCCGTTAGATGTAGGGCTCCGTGTTGATACCGATGAACTAAACCATCTTCACCTTTACACTGGGGATTATAAACCTGATTATCATTGCTTGGTGGACGCACAAGACCAGGAGGTCAAATATGGATGTTAAGTTGGAAGAACCCCATTGGTAGAAGAGCAATAACTAAACAAATGTGCTGTGATGCTCTCAAGATTCAGGTTTGTAGATTTATTTAAACAGAACAACAGGTATACGGAACTCTTGGGAGACCCATTTTGAGTTTATCAACTAATTTACAAGATGGACGCAGAGTTTTGatatgaaagaaaagaaaaaatgtatatgattattgagaaaaaaaacatcaaatccAACAGGTGACAAAGCTTGTCTTGCTTTTAAATTCTTAAATGTAGTTGATTAAAAATACATCAGCTTTCTGTGCAGGAGGGCATGACAGAAAAATGTTGTACATAAGCAGCTATGCAACAGCGTTTCCTGATTTAATTGTAGTTTAAATTAGCAACATTTTGAATGAAGTCTGCTGCTAGGTGATAAAAGAATGCCAGGTTTCAGTAGTTTAAGTTTTTGCTGCAGATTTAACACTCAGCCCTCGTCAAGCGTTGCTCTACAAGTTGCAGTCGAGACGTGGCAAATTTTGAGGTAACAAAAGTTTGTGGCAACATGAAACAAACTGAAGAGTTGTTAGAAGGGAATGTTGCTCTGGAAAAGTTGACTGGTGGAGTAAAGCCTGAACCGGAGTTTAAaggtcaaaaacacacacacgccttcCTCCgtccacacacaaatacacacacacacacacacacacactccagctGTATAATGTTAAAGCAGGTCAGAAGTAATTATGTCATCGTCATCACTCCCCTCACTCGGCAATCATCTCTTCACCTGAAACGTTGCAggaaacattttacttttaagtTTTTAATAAATGGCTCGTTAGCATCGTTAGCGTTCCCCAGTGAAAGCGAATGGGAGCCTGGCTAGCTGGGAACAGTGAGAGTGTAACATTTGAGGATTGGAATCACTACAGCAGGTGAAGGGTTATTTTGCCTTTCAGTAAGTGTGTTTGCTCGTTAAGAAAAAGTCTGTAATTAGTCACCATGGTAACGCTTAACTCGCacattgagattttttttttttttttttttttaaagatatttttggGGAATAAAATGTCGGTAGCCTGCACCTTTAGGCATCCCTACATGAGCTCAACCAAATGCACTGCTGGTTATAATTTAACCCCTCggcttctgtctctcttttctctctcgcGAGCATTTATCTCGTGCCAAAACAGTGTctcatgtttttattatttcttcatgTTTCAGCTGAATGAACTCTTGTCAGCAGGAAATAAAATCTCCTGgtttgaaacaaaataaaatgacaacagaagaaATCGGCTGCAGGTGGTGTTCTGGGCTTCTGTGAGACGaagaaaatgatttatttattttcataatagGGGATTGAAATTCTTCATTATTTTGCTTCATTCAATAAAGACTACTGTATGTATTGAAGTCACTCCGG

Function

GO:

id name namespace
GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient biological_process

KEGG:

id description
ko00190 Oxidative phosphorylation
ko04714 Thermogenesis
ko05010 Alzheimer disease
ko05012 Parkinson disease
ko05016 Huntington disease
ko04932 Non-alcoholic fatty liver disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU82713 True 2595 lncRNA 0.38 2 15106265 15129963

Neighbor

gene id symbol gene type direction distance location
LOC120560949 LOC103368073,LOC103397982 coding downstream 2157 15078885 ~ 15104108 (-)
ppiaa LOC107103142,LOC106904245,LOC103470758,LOC106953379,LOC103129635 coding downstream 29870 15070267 ~ 15076395 (-)
LOC120560022 slc18a1,LOC100703472,LOC106527823 coding downstream 41424 15045882 ~ 15064841 (-)
LOC120560533 NA coding downstream 115120 14989147 ~ 14991145 (-)
tsc1a tsc1 coding downstream 481068 14600261 ~ 14625197 (-)
adam9 adam9 coding upstream 28418 15158381 ~ 15199350 (-)
ercc6l LOC102777350 coding upstream 72176 15202139 ~ 15211704 (-)
LOC120560836 LOC103398011,LOC102234551,LOC103373450,LOC107386141,LOC101064581 coding upstream 179095 15309058 ~ 15317062 (-)
si:dkey-220o5.5 NA coding upstream 213460 15343423 ~ 15363941 (-)
rsph14 NA coding upstream 273885 15403848 ~ 15408301 (-)
G61711 NA non-coding downstream 37372 15068542 ~ 15068893 (-)
G61706 NA non-coding downstream 78870 15026519 ~ 15027395 (-)
G61699 NA non-coding downstream 112485 14993477 ~ 14993780 (-)
LOC120560531 NA non-coding downstream 121080 14983467 ~ 14985185 (-)
G61695 NA non-coding downstream 140480 14965307 ~ 14965785 (-)
G61742 NA non-coding upstream 23031 15152994 ~ 15180419 (-)
G61813 mak16 non-coding upstream 173766 15303729 ~ 15306067 (-)
G61837 ppp2cb,LOC102205414,LOC106587035,LOC100710281,LOC105025380 non-coding upstream 295588 15425551 ~ 15427495 (-)
G61894 LOC103373661,LOC101481450,LOC102205139 non-coding upstream 328870 15458833 ~ 15462921 (-)
LOC120560849 NA non-coding upstream 411869 15541832 ~ 15544351 (-)
tti2 tti2 other downstream 64885 15029876 ~ 15041380 (-)
LOC120559984 NA other downstream 88449 15013533 ~ 15017816 (-)
trnas-gcu_3 NA other downstream 137688 14968496 ~ 14968577 (-)
trnas-gcu_2 NA other downstream 138105 14968079 ~ 14968160 (-)
trnas-gcu_1 NA other downstream 138505 14967679 ~ 14967760 (-)
sdhaf1 sdhaf1,LOC102800057 other upstream 86587 15216550 ~ 15218422 (-)
LOC120560831 NA other upstream 95007 15224970 ~ 15232693 (-)
mfsd14bb LOC103398013,LOC102210719 other upstream 122652 15252615 ~ 15278184 (-)
LOC120560838 NA other upstream 239063 15369026 ~ 15402324 (-)
LOC120560105 LOC103362503 other upstream 1022457 16152420 ~ 16452488 (-)

Expression


Co-expression Network