G61813 (mak16)


Basic Information

Item Value
gene id G61813
gene name mak16
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 15303729 ~ 15306067 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU82801
CGTATAAAGCAGgtttacagtttgttttcttccaaaaTTGATTTATTGTCATGTTCATCACCTGTTACTTTGTTTTCAAAGAGGATTCTGGACTCaatatttaacaaaacaaacaaagttaTTTTTAAAGTCACTGTTAAGCAGACAAAGCGTTAAAGTCACTTTGGGTGTTTTAATCAGATCTGATTCCAGGTCAGATCCGTCCTGTGTGTCCATTAACAAACAAACTTCCATTTACAGTCTCTGTACGAACAAACTGATGACCACCGTGGAGGGGGTGTGTCCTCAGCACAGGGTGTGACATCACGACGTGGCTCTGCTCTTGGCGACGGGCTCTGTCTCGTACTCGATCTCTACGTATGCTCGCTTCTTCCTCGCCGCTGAGCCGTTGGCTGGAGATTTGCCTTTAGACTTAGAGGCCTTCGTCTttgtctccacttcctcctcctcctcctcctcactggACTCCTCTTCCTCGTCCTGTTCCTCCTCATCGCTGCTTGTCTTCAGTTTGTTCATGTCCTCAAAATCGCTCAGGTCGCTCTCATCCACTTCGTCGTCTGCTACAAACTCTCTCTTCCCAGTGTCCTGCAGACACAAAGGAGACGCGTTCACATCACCACACGCTAAACGAGTCTTCTGACTGCACATACAAACTCAAACACTGTGTGTAaagtcagtttcagcagatatgagGAAAGTGTccttcatcacctcatcatcttcttcctcctcctcctcctcctcctccccctcttcctcctcctcagacTCGCTCtctgcgtcctgctgctccagAGCTTTGTCGAAGGCGTGGACTGGGAAGTTGTAGATGTCTCCGTACTGAAAACACACATCAAACTTAATACATATAATCGTATTTATTACAAGAACCCATTTCACGGTCTGCAGTTGCCTGAACTTTTTGAACTCCTTTTAATGCTGTATTGTTCTGCTCCGGGTGAACTTGAGTTAAAGTTTCAGAGTGTAGTACCGTTCCCTGTTTGAGTCTTTCCAGAAGCTCCTTCTCGATGGCGTTATCCAGCTGAGCGGCGATCAGAGCTTTCTCCTACAAACACAACACGCATCAATGAATGCCCCTCCATCAGGTTAATGCACCTTTAATGTTGGAGTCTAACCATGTCAAGAGTTAACAATATGCTCTCCTCGTGTGTGGAGTTGATGGCTcacctctttcctcttctctctcctctccaccttCCTGCTGAGAGGAACCAACTTCCTCCTgaaaaaaacgtcagaaaacatatttttgtgatCCCTGCCGTTAACCGGTTTACATTCCTGGCATTGTGTACATTTGGTTTGCACCTTATTGTTACATCTTTTATTTGCATGTATACTTTGTACTGCAGCTGCTTGACAACAGTTTCCCTCTGGATAAATGA

Function

symbol description
mak16 Predicted to be involved in maturation of 5.8S rRNA and maturation of LSU-rRNA. Predicted to be located in nucleus. Predicted to be part of preribosome, large subunit precursor. Predicted to be active in nucleolus. Orthologous to human MAK16 (MAK16 homolog).

NR:

description
PREDICTED: protein MAK16 homolog isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82801 True 1409 lncRNA 0.45 2 15303729 15306067

Neighbor

gene id symbol gene type direction distance location
ercc6l LOC102777350 coding downstream 92025 15202139 ~ 15211704 (-)
adam9 adam9 coding downstream 104379 15158381 ~ 15199350 (-)
ogdha LOC103368074,LOC101476977,LOC103397981 coding downstream 151120 15109016 ~ 15152609 (-)
LOC120560949 LOC103368073,LOC103397982 coding downstream 199621 15078885 ~ 15104108 (-)
ppiaa LOC107103142,LOC106904245,LOC103470758,LOC106953379,LOC103129635 coding downstream 227334 15070267 ~ 15076395 (-)
LOC120560836 LOC103398011,LOC102234551,LOC103373450,LOC107386141,LOC101064581 coding upstream 2991 15309058 ~ 15317062 (-)
si:dkey-220o5.5 NA coding upstream 37356 15343423 ~ 15363941 (-)
rsph14 NA coding upstream 97781 15403848 ~ 15408301 (-)
srp19 srp19 coding upstream 103129 15409196 ~ 15415459 (-)
LOC120560845 NA coding upstream 166003 15472070 ~ 15502444 (-)
G61742 NA non-coding downstream 123310 15152994 ~ 15180419 (-)
G61740 NA non-coding downstream 173766 15106265 ~ 15129963 (-)
G61711 NA non-coding downstream 234836 15068542 ~ 15068893 (-)
G61706 NA non-coding downstream 276334 15026519 ~ 15027395 (-)
G61699 NA non-coding downstream 309949 14993477 ~ 14993780 (-)
G61837 ppp2cb,LOC102205414,LOC106587035,LOC100710281,LOC105025380 non-coding upstream 119484 15425551 ~ 15427495 (-)
G61894 LOC103373661,LOC101481450,LOC102205139 non-coding upstream 152766 15458833 ~ 15462921 (-)
LOC120560849 NA non-coding upstream 235765 15541832 ~ 15544351 (-)
G61956 NA non-coding upstream 467612 15773679 ~ 15777138 (-)
G61993 NA non-coding upstream 631909 15937976 ~ 15939248 (-)
mfsd14bb LOC103398013,LOC102210719 other downstream 25545 15252615 ~ 15278184 (-)
LOC120560831 NA other downstream 71036 15224970 ~ 15232693 (-)
sdhaf1 sdhaf1,LOC102800057 other downstream 85307 15216550 ~ 15218422 (-)
tti2 tti2 other downstream 262349 15029876 ~ 15041380 (-)
LOC120559984 NA other downstream 285913 15013533 ~ 15017816 (-)
LOC120560838 NA other upstream 62959 15369026 ~ 15402324 (-)
LOC120560105 LOC103362503 other upstream 846353 16152420 ~ 16452488 (-)
G62064 NA other upstream 1198559 16504626 ~ 16505067 (-)
LOC120561322 NA other upstream 1242550 16548617 ~ 16551175 (-)
LOC120560425 NA other upstream 1777412 17083479 ~ 17085821 (-)

Expression


Co-expression Network