G61837 (ppp2cb,LOC102205414,LOC106587035,LOC100710281,LOC105025380)


Basic Information

Item Value
gene id G61837
gene name ppp2cb,LOC102205414,LOC106587035,LOC100710281,LOC105025380
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 15425551 ~ 15427495 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU82830
CTGGCCGGCTGCACCACAGCTAATGTAGCCAGATATCATCTATGCTACTCTCATAGGTGCACGTTGTAATACATTATGTAGAAATGTTACAGGTCGTGAAAGAATAAAtctaattttaaaaataaattcagTCCATCTCTCAGCCCTACCGGAAAATGAGGTAAACGTGAAGTCCATATACTTACAAAGAGTATTTCAGAGTGTCGTCCAGTTCCATGATGGCTGCCTGGTTTCCACAGCGGTAACAGTAGTTTGGAGCACTAAAGATGGTCACCACATTCTTATCATGGCCCCAGTTGTAGCCCTCCATGACCAGCTGATGGGCGCGGGACACCAGAGTGAGGCCGTTGGCGTGGTTAAAGGTTTCAGAGATGTCCTGTCCGAAGGTGTAGCCGGCACCTCGGGGAGAGATGCCCCACCCACCACGATCATCAGGGTCTGACCACAGCAGGTCACACATCGGGCCTCATGTGGGACTTCTTGCAGGCGGTCCAGAGCGCGTATGTGATCCAGAGTGTCTATGGAGGGAGACAAACCTCCGTGGAGAC

Function

symbol description
ppp2cb Predicted to enable protein serine phosphatase activity and protein threonine phosphatase activity. Orthologous to human PPP2CB (protein phosphatase 2 catalytic subunit beta).

NR:

description
PREDICTED: serine/threonine-protein phosphatase 2A catalytic subunit beta isoform-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82830 True 548 lncRNA 0.50 3 15425551 15427495

Neighbor

gene id symbol gene type direction distance location
srp19 srp19 coding downstream 10092 15409196 ~ 15415459 (-)
rsph14 NA coding downstream 17250 15403848 ~ 15408301 (-)
si:dkey-220o5.5 NA coding downstream 61610 15343423 ~ 15363941 (-)
LOC120560836 LOC103398011,LOC102234551,LOC103373450,LOC107386141,LOC101064581 coding downstream 108489 15309058 ~ 15317062 (-)
ercc6l LOC102777350 coding downstream 213847 15202139 ~ 15211704 (-)
LOC120560845 NA coding upstream 44575 15472070 ~ 15502444 (-)
LOC120560846 LOC104943351 coding upstream 76879 15504374 ~ 15514901 (-)
LOC120560851 NA coding upstream 142204 15569699 ~ 15577254 (-)
LOC120560852 NA coding upstream 153797 15581292 ~ 15590436 (-)
LOC120560853 NA coding upstream 163850 15591345 ~ 15602271 (-)
G61813 mak16 non-coding downstream 119484 15303729 ~ 15306067 (-)
G61742 NA non-coding downstream 245132 15152994 ~ 15180419 (-)
G61740 NA non-coding downstream 295588 15106265 ~ 15129963 (-)
G61711 NA non-coding downstream 356658 15068542 ~ 15068893 (-)
G61706 NA non-coding downstream 398156 15026519 ~ 15027395 (-)
G61894 LOC103373661,LOC101481450,LOC102205139 non-coding upstream 31338 15458833 ~ 15462921 (-)
LOC120560849 NA non-coding upstream 114337 15541832 ~ 15544351 (-)
G61956 NA non-coding upstream 346184 15773679 ~ 15777138 (-)
G61993 NA non-coding upstream 510481 15937976 ~ 15939248 (-)
G61996 NA non-coding upstream 555381 15982876 ~ 15983411 (-)
LOC120560838 NA other downstream 23227 15369026 ~ 15402324 (-)
mfsd14bb LOC103398013,LOC102210719 other downstream 147367 15252615 ~ 15278184 (-)
LOC120560831 NA other downstream 192858 15224970 ~ 15232693 (-)
sdhaf1 sdhaf1,LOC102800057 other downstream 207129 15216550 ~ 15218422 (-)
tti2 tti2 other downstream 384171 15029876 ~ 15041380 (-)
LOC120560105 LOC103362503 other upstream 724925 16152420 ~ 16452488 (-)
G62064 NA other upstream 1077131 16504626 ~ 16505067 (-)
LOC120561322 NA other upstream 1121122 16548617 ~ 16551175 (-)
LOC120560425 NA other upstream 1655984 17083479 ~ 17085821 (-)
G62194 NA other upstream 1696501 17123996 ~ 17124477 (-)

Expression


Co-expression Network