G61867


Basic Information

Item Value
gene id G61867
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 15532867 ~ 15572973 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU82871
gttatgatttgatactataaataaaattgaattgaattgaattcaaccgttagctcgttagcatgctaaccgttagcattagcatgctacgtcgttctcaatagcaaagcactgctacaacacacacaagttcaccataatctacaaaagaattacttacatgtgcgccctcatttagaagtctcccagctaatcctgccttgtaactgaccaaagttggagaaatagcctcttttactgtctctagagttagctagctgacatgctctacatctgagctactgagcatgtgcgagtgcaatcaaagatagtacagaagaagaagatgaaaacaggtctcactctgtagctaaaacagaaaccaggtgaaaaaaggatctgcagcagtgagagagagctgtgcagtacaacaaaaatatggtgttttttgaaaatcaaaccatgtaaacctattctggtacaatcttaaaatacagttatgaacctgaaaatgagcataatatgggcgctttaaattcCTTGCTCCCTCATGAGcatataaaataaagacactgaagaaattggactctaaaatctagaaactataaagataattaagtaataaattccatgcacaccgtaaacatgaatggaacagagtatattcatcagttatttccccccagcaatatataaggtcaaaaaccattgaggtgtcctctccctgttgttacatgaatgtacagtagcctacatcactaggtagttactggtccagtgaactaagactataatttgggaggattgtacaataagaatatgttcttaaaattgtacaatcctcccaaattatagtcccagtttactggacaacacaaattgtgtgctaagaatgccaaatacaatgcaaacatgatccgtattgttaaagaataaaaaaaaaaaataatgtatcaactaaaataaatcaaggtacattggtcaactatagaaatgtacagcattgtatgtattgcctttaGTAACCGACTtcatataaaacacatttgaaattttatcagccttttcttaTCATCTCAACAGCTGCCGTAATATAtccatcaaacttctaacaacaatatgaacagcagtacatacagcaatataaccgtaacaatgactgtcacatgagtaattataaaaaaaaaaaataatggtcataACTTTacataataacagtacttaaatgaacagcaatatgcacctgttgaattttaatccaggctgataacaatagggtaaaaccactgctgggtgatcagaaaaggctgcaggattaaataaatcctggctgttagccaggtcaggagcaggctagctgcacagaataaatctccatggtgatttatgtgcctccgttttcgtgaaaccgagtcaaggctaaattcatccaggataactggaatatcccggcttaatcccttatcttggttttgtgaaacaaacAAAGATGATGTTTCTATCATGGGGCTAGCACATTATTGGAAGAATATAAACATCTGAgggcagggttcaaaattaacttttcgtccaccagccaaatggctagtgaatgtttaaatttgaccagccactcaatagactaccattgtttttttggctagtaagtgaagcaaatctaccagccaccaGCATTTGGTGTGTAGCTCgggctaattttgaaccctgtctGTGAAGAATGAGAGTGATTTACATGAAGACGCCAATGTGAATGAGAGACAACAAGATTCGGGAAGTTCTGTCGGTAAGGGCTGATgccaaaattgtcaaaaaatgtaATGAACGGAACTAGCCAGGTGCCACCCCTGGCCTAGATCAAACAGATTATTAAGTAAGAACGTTACATGTGTAAAAGGAAAACTCAAGACATTGTCCAGAGTTCATATGAGACAATGGCTTTACTGTCACATAGTGAACTGGGGTTTGAAAAAACCTACATAACATCCAGAGAACTGGATTAGTAGCCATATCATTTGATTTTTAGTCAGAAGTTCCCATTTCTACACACTTCAACAGActatttttgtttgtctgtatgagtcATATGGCTGTATTAATGTCTTTTCCCTGTGTGTCGATTTAATTTTTTCCTCAATAACTTTGTGTAATCTGAAGATGGAGACATCGATCTGTAATGTAGTCAATAAATGTAAACCTGCCACCTTTGTCGTTGGGCTGTCTGCAGTTTGTGAGTTTCTAACTCAgaaatatataacataatagaaacaacagaaacaacagcagcacaaccacAGCAAATGTCCATTTTCTTCTCTTATGATGGTACTCTTCTTGGAGCTTCCTGAGGCTGGTTTTCCCCTCCTCTAGGCTTTGTTTATCCTCTTGACGTATTCGTTCCCAGGTCTCCTTTCTTTCCTTATCCCAGGCATCTCGATCTCTCTTCGTCTCTTTTCTAAACAGCTCCAGCTTCCTCTCAGCGTTTTCCTTTAGCTCTCTTTCTAACTGAACGGTTTTCTCTGAAGCTTCCAATTTTCTTCTCCATTCCTGTCGCAGAGTTTCTTCTTGCTTTTTgcgtctcctctcctcttcctcccgttctttctttctcttctcacGCTCCTTGTTGATGCATTCGTCTTTTTCCTGTAGCTGTTTTTCTCTcagtttcctctcctcttctttgattttgcttttcagtgttttcaAGTCTTCCTCGTGTTTTCTCCGGAGGTCCTCATCCTTTCTCTTCATctcttcttccttctctttcAAGATGTTCTGCACTTGCATTTGTATGTATCCCTCTGTGTCGTCAGACATCTCATTGTTGTAGCAGCCGCCATTTTCCTTCACCATGGTCTCGATATTGGTCAGCAGCTCTCTGACTTGTGTGCGGTTTGTGTCATCTTTGTTGTTGAAGACCTGGTATCTCCCTCCACAGTCATTGATGAGTTTTTTGACAAAGCCATCACAGTTTTCGACATAACTCTCAAATAACTGATCCTCCAGATCATCTCCTCTGGTGAATATAATGATGATGAAATCTTCAGACTTCTTGCCAAAATATTTCTTGATCAGTTCCACAGAGTCTTTTTCCTCTTGTGTGAAGTTCCCAATCTGCAGCACCAGTAAGAACACATGAGGTCCGGGAGACAACATGctgatgcatttttttatttcctgctGACCTTCATCATCAGACAAAGTCTTGTCGAACAAGTCGGGGGTGTTCACGACAACAACTGGCCGTCCCTCAATCTCTCCCGTTGCTTTCTTACAAGACTTTGTCGCTGGCTTCGGTGTGATTCTGGGTTTGAAGTGCTTTTCGCCCAAAATGGTGTTTGCTGTTGCACTCTTCCCACTGCCAGTCTTCCCAATCAGCACCATCCTGAGACACTCTCTGCTCTGACTCTCACCATCACCTCCTATGGCCGTCTTTTGTTTCACATCCTGCAGCTCAGCTTCAAGTCTTGAAACCTTCTCCATCTGAGCCTTGGTGAATATGTCCTTTGTGAAGCATCGGGATCCTTCAACTCTCGTCTTTTCAACAGCATCCAATAGCTCTGGGATCTGCTGCTGGTCCTTGATGTTGAGAACAACatatcttcctccacagctctgacagagctcctgGATGCCATTGTCTTTCTTTAGAAACTTAACAACAGCTGGAGCTGTAGGATCTGACTCCACAGTGAACAGAATCATGGTGAAGTGATTGACTCGAGAGCTGAAAGTGTTCTGGATGGTCTCTAACTCTCCCTTGTCTTCATCAGTGAGGGGACCCACAGGTAGGACCAGGATGAAGGCATGGACACCCTCAGGATCACAGAGGGAGATACACCTGAATGATTCCTCCATCACTTTCTCCTGACCTTCTCCATACAAGGCAGGCAGCTCCACCAGGGACACCCGACGTCCACACACCTCTCCCTGATGTTTAACACACTCTGATGGGTTGGAGACTGAATGGAGCTCTGTCTGACCTAAAATGGCCTTGGCTGCTGAAGTCTtccctgctcctctcctcccaCACAGAACCAGGTTTAAAGCTGGTCTGATGTGTCCAGATGTTGGTGTCATGATCAAACCTGCATCCTCAAATACATCACAGCTCACATGCTCTCCATTGTGTTCCGTTGCAGTTTGATTTAAACGTGTTAACAGCTCTGAAAGTTCAAGGTTCTTCTGCTTCAAGTATCTGTATCTACACATTTTGATCATGTCTTTTAATGACTGGTCTGGTTCATCTTTGTCTTTGAAAGCTGCGCTATCCTCTCTGGGTGTTGATATCAATATCAATGAATGGTCAAATGATTGATAACCGAAGAGTTTCAAGACTTGGCAGAGCTTCACTTTGTGTTTCTCAGTGAAGTCTTCAGGCTGTAGAACCAGCAGGAACACATGAAGGCCAGGATCAGAGAGTCTCCCACAGTTTTCTAAATGTTCTGTCAGTTTTTCTTCAGAGATGTTGGGGTGCAGCAGATCTGGAGTGTTGATCAGAACGATCCCTTTGTCCTTTaactgtcctctttctctcagaCAGCGGTCTGGTTCTTCCTCAGTGTTGAACACAGTCTCTCCCAGTATGAAGTTCCCCACTGAACTCCTCTCAGACCAGCTGTTCCCCAGCAGAACAACCCTCAGCTCTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82871 True 4633 lncRNA 0.41 2 15532867 15572973

Neighbor

gene id symbol gene type direction distance location
LOC120560525 NA coding upstream 12462 15508922 ~ 15520405 (+)
LOC120560844 LOC104935222,LOC101481450,LOC102294942,LOC106534038,LOC108245882,LOC100710015,LOC107386134 coding upstream 65459 15435741 ~ 15467408 (+)
LOC120560841 ppp2cb,LOC100710281,LOC105920955,LOC101157601,LOC103131405 coding upstream 102285 15416456 ~ 15430582 (+)
mak16 mak16 coding upstream 226767 15298400 ~ 15306100 (+)
LOC120561495 NA coding upstream 234224 15298542 ~ 15298643 (+)
LOC120561471 NA coding downstream 31993 15604966 ~ 15612582 (+)
trnac-gca_19 NA coding downstream 44912 15617885 ~ 15617956 (+)
trnac-gca_20 NA coding downstream 45771 15618744 ~ 15618815 (+)
trnac-gca_21 NA coding downstream 46100 15619073 ~ 15619144 (+)
kiaa0825 kiaa0825 coding downstream 238712 15811685 ~ 15938853 (+)
G61782 LOC106527778 non-coding upstream 156865 15374777 ~ 15376002 (+)
G61770 LOC103398011,LOC102234551,LOC103373450,LOC107386141,LOC106527788 non-coding upstream 218289 15306447 ~ 15314578 (+)
G61757 NA non-coding upstream 291425 15240416 ~ 15241442 (+)
G61754 NA non-coding upstream 307898 15224547 ~ 15224969 (+)
G61756 NA non-coding upstream 308402 15224114 ~ 15224465 (+)
G61966 NA non-coding downstream 388628 15961601 ~ 16045838 (+)
G61968 NA non-coding downstream 462478 16035451 ~ 16056705 (+)
G61970 NA non-coding downstream 475410 16048383 ~ 16050693 (+)
G61975 NA non-coding downstream 550227 16123200 ~ 16198871 (+)
LOC120560394 NA non-coding downstream 561621 16134594 ~ 16142799 (+)
LOC120560526 NA other upstream 71 15518780 ~ 15532796 (+)
zgc:101664 NA other upstream 97932 15431708 ~ 15434935 (+)
spinb spin1,LOC103373448,LOC108245887,LOC101477468,LOC100698355,LOC106527790 other upstream 180242 15249744 ~ 15352625 (+)
nudt18 nudt18,LOC104957221 other upstream 308852 15219137 ~ 15224015 (+)
G61535 LOC103368073 other upstream 449419 15078874 ~ 15083448 (+)
mctp1a mctp1,LOC102782783 other downstream 63825 15636798 ~ 15777141 (+)
fam172a fam172a,LOC102785942 other downstream 370725 15943698 ~ 16099484 (+)
LOC120560890 NA other downstream 895337 16468310 ~ 16475905 (+)
LOC120560897 LOC105925468 other downstream 959943 16532916 ~ 16534175 (+)
LOC120560947 edil3 other downstream 1712675 17285648 ~ 17414595 (+)

Expression


Co-expression Network