G61970


Basic Information

Item Value
gene id G61970
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 16048383 ~ 16050693 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU82995
gtaatGTTAAAAGTGATAGTGAATTCTTGCTGAACCTTAGTTTATAGTATGTTCTGTTATTCTAATGCAGGTTTTGGAAGGTATGGAGTACACATCCTCTTTCTAAAGTATAACAAGCCGCCTAGGCACAAATTGAATACTTgacttgatattttagattcttcaaagtagccatcctttgcttttttattaataagggaaacaattccaataattaaccctgacaaagcacacctgtgaagtgaaaaccatttcaggtgactacctcatgaagctcattgagagaacaccaagggtttgcagagttatcaaaaaaggcaaagggtggctactttgaggaatctaaaatataagacatgttttcagttatttcacacttttttgttaagtacataattccatatgtgtttcattcatagttgtgatgccttcagtgagaatctacaatgtaaatagtcatgaaaataaagaaacgtgTGTCCaaagaaggtgtgtccaaacttttggcc
>TU82996
gtaatGTTAAAAGTGATAGTGAATTCTTGCTGAACCTTAGTTTATAGTATGTTCTGTTATTCTAATGCAGGTTTTGGAAGGTATGGAGTACACATCCTCTTTCTAAAGTATAACAAGCCGCCTAGGCACAAATTGAATACTTgacttgatattttagattcttcaaagtagccatcctttgcttttttattaataagggaaacaattccaataattaaccctgacaaagcacacctgtgaagtgaaaaccatttcaggtgactacctcatgaagctcattgagagaacaccaagggtttgcagagttatcaaaaaaggcaaagggtggctactttgaggaatctaaaatataagacatgttttcagttatttcacacttttttgttaagtacataattccatatgtgtttcattcatagttgtgatgccttcagtgagaatctacaatgtaaatagtcatgaaaataaagaaacgtgTGTCCaaagaagTTCAATGGCACCATTGATCGGCGGACGAGCTGCTTGAAGTGATGATGCTATGCGTTAGAGGCAGCCAATGTGATGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82995 False 509 lncRNA 0.35 2 16048383 16049879
TU82996 True 567 lncRNA 0.37 3 16048383 16050693

Neighbor

gene id symbol gene type direction distance location
kiaa0825 kiaa0825 coding upstream 109530 15811685 ~ 15938853 (+)
trnac-gca_21 NA coding upstream 429239 15619073 ~ 15619144 (+)
trnac-gca_20 NA coding upstream 429568 15618744 ~ 15618815 (+)
trnac-gca_19 NA coding upstream 430427 15617885 ~ 15617956 (+)
LOC120561471 NA coding upstream 435801 15604966 ~ 15612582 (+)
LOC120561380 NA coding downstream 410545 16461238 ~ 16467976 (+)
LOC120561386 NA coding downstream 426805 16477498 ~ 16484029 (+)
LOC120561387 NA coding downstream 436701 16487394 ~ 16492635 (+)
LOC120561368 LOC104951926 coding downstream 444542 16495235 ~ 16504736 (+)
LOC120560896 LOC103362386,LOC102790232,LOC102295658,LOC102208013 coding downstream 486433 16537126 ~ 16540185 (+)
G61966 NA non-coding upstream 2545 15961601 ~ 16045838 (+)
G61867 NA non-coding upstream 475410 15532867 ~ 15572973 (+)
LOC120560848 NA non-coding upstream 502906 15540869 ~ 15545477 (+)
LOC120560847 NA non-coding upstream 508539 15539355 ~ 15539844 (+)
G61782 LOC106527778 non-coding upstream 672381 15374777 ~ 15376002 (+)
G61975 NA non-coding downstream 72507 16123200 ~ 16198871 (+)
LOC120560394 NA non-coding downstream 83901 16134594 ~ 16142799 (+)
G62033 aqp3,LOC103362379,LOC107393848,LOC105031174 non-coding downstream 461478 16512171 ~ 16514043 (+)
G62082 NA non-coding downstream 516789 16567482 ~ 16567714 (+)
G62085 NA non-coding downstream 559784 16610477 ~ 16620136 (+)
mctp1a mctp1,LOC102782783 other upstream 271242 15636798 ~ 15777141 (+)
LOC120560526 NA other upstream 515587 15518780 ~ 15532796 (+)
zgc:101664 NA other upstream 613448 15431708 ~ 15434935 (+)
spinb spin1,LOC103373448,LOC108245887,LOC101477468,LOC100698355,LOC106527790 other upstream 695758 15249744 ~ 15352625 (+)
nudt18 nudt18,LOC104957221 other upstream 824368 15219137 ~ 15224015 (+)
LOC120560890 NA other downstream 417617 16468310 ~ 16475905 (+)
LOC120560897 LOC105925468 other downstream 482223 16532916 ~ 16534175 (+)
LOC120560947 edil3 other downstream 1234955 17285648 ~ 17414595 (+)
tmem167a tmem167a,LOC103397084 other downstream 1517320 17568013 ~ 17572705 (+)
cmya5 cmya5,LOC106958347,LOC104953151 other downstream 1947993 17998686 ~ 18011030 (+)

Expression


Co-expression Network