G62001


Basic Information

Item Value
gene id G62001
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 16117227 ~ 16141681 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU83037
tctcttAGTCGTGGGGGAGACATACTGAGAGGAGTTAAGGGGTGAGGAATGACGGAtatgaggagaggggaggaggaggacagaagATTGTTGTGGAATGTTTGCCGTTCTGGCCAGAACTCGACCATCTCATTTGTCAGGGCTTGACCCCAACTgtggggtcaaaggtcaaagggAACATCTGAGGGAAACTGACTggctatcacacacacacacacacacacacacacacacacagtcaagtaaacacacaaacatctgtgtgtctctccttTAGCACTCTCACACATAATTCAAGCTCATGCACAGTACATCTGTATATATCATCATTAATATCCATCCTAgtcttatttgttttattaatactGAGTGTTATGGTGACCTCTAGCTATTAAAAGAGCAGCTGCCAGTTTCACAAAAAGCATACTATGGTCTTTTTCCAAAACAAATCATTGAGAAGGAATTTGAGTTCCAGGATGCTTGGATTCATTTCTGAGTAGAAAAGCTTTGGATAGTACTTGATAAACACACACTAGTAAGTAATGTACAAGAGCAGCCTCTTAAAATCTATTCCGAGAGTGGCTATTTATTTACAGTTAATGTAATATTTACCACATGTATGAATCAGTACAATGAGCCAGTCAGTGCAGGGCTGTCATGTCAAGTGAGCCCAACGCTCATACTAAGCAGTGGTATCACCGTCACCATTCTGTAATCAAACAGCACTCGCCCTAAATTACATCTCAACCCAGTGTCTGTCGCTTGCAGCACACCGACCATCCCGCTGTGTTTCCGAACGCCTGGCCGCCGTGTCGCTCTCTGCCTGCGAGGAGACACAACAGAAACTCAGTTACAAAAGGGCAAGGTTAGCTCCACCGAATCACTCAGACTCTGCTTCACGTTTCACATTGAAGTGAGGAGAAAGCTGGCAGCGACAGTGTGTGTGGCCCGCTTCAATGATCACTGGACACCTGTGAGTCACATACAGTAACAGTAAGACAGAAGCCACACCTTGCACACTGTAAATGGTAGCTTGAGTTCCTGTTGAGTTTTATTAATGTGCAAATGATGATTGGCATACTAAACAGTACTGTATGGCTCGTCTGTGGTCGCTCTCTTCTACACCCCCTGTTAGGAAACAAATTGTTCATTTTTGCGCTTTAAAATGCAGCTCTCTATCTCCCTCTTTTTCTACTCTAAGGGGAGACAGGTAGCACAGCAGCTGATATTCATGGCTTTTAAGAAGGATCTTAAATCTTACACCTTTGTCATTCTTTGGCCGGAGACATCAAACAGGTGCTATGAATAATTTATCTTAAGAGTTTCACATTGATAAGGTCACAATCTGCCAGGTCTGGACACTAAACACAGGCCACCTTCACTTCACTGTCTTTTTACACACATGTGccaacaccagacacacactctcaaacaaaataaaaaaagttaagaGCATTTTGtccatgtgtgtgggtgtgtaagaGAAAGGGCTATATTCTTTGTTTAaaatattattgtgtgtgtgtgtgtgtgtgtgtgtgtgCTAGTCAGTGTTTTCAATTAGAAATGTGTGATTAAAACACAATTGCTGTGTTATATTTTagcataataaataatatgtcACAGATGTTTAGGAGGGTTGGAATTAAAGTACAACTTTGATTGCAGCTTCGTATCCctatatatattcatttatgGCAAATAATATTttccaaatgtaaataaataaagatgtgTTTCACTCAAACTGCCTCTGGGAATTTGTGAGGAaatcattttgttgttgttttctgtgaTGTAAAGGAGACTGCACCAGTGTGCTCAGTCATTCTCAGCTCCAGCATGCTGATGGTTCAGCTACACTACATTTCTAATTAAGCCCCTGCTGTGTGTTGGTTTTGAGGGGGGGACATTCGAGAAAAAATAATGCACTCATTTAGTTACAAACCAAAAGTTAAATAACCAAACAAGTTCAACCAAATGGGGCAAACTGACCCAGTGTTAGTAATCCTTGCAAGGTATCATAACCAAGAGTGTATCCTTGCTCATCTTCGCTCACTTTTATATTGATGTTAATTTACTCAGCATAAATATTAATGGGTAAACTCTTTTTAGATGGCTCCAGCAGCCACTACCTACACCACTACGACAGTGACGGGACACTTATGAACggcaagcttttttttttgtctcccccTTCGAAAGCACACAGGGAATAGCTCCTCTAATGTGTTGaccccccctcctcttcctcttccctcctctgtctctctctctctctctctctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83037 True 2290 lncRNA 0.42 3 16117227 16141681

Neighbor

gene id symbol gene type direction distance location
slf1 slf1 coding downstream 305807 15777243 ~ 15811420 (-)
fam81b NA coding downstream 482721 15622929 ~ 15634506 (-)
LOC120560939 NA coding downstream 494999 15615792 ~ 15622228 (-)
LOC120560853 NA coding downstream 514956 15591345 ~ 15602271 (-)
LOC120560852 NA coding downstream 526791 15581292 ~ 15590436 (-)
aqp3a LOC103362379,LOC108242818 coding upstream 370696 16512377 ~ 16519316 (-)
nol6 nol6 coding upstream 389971 16531652 ~ 16546472 (-)
LOC120561320 NA coding upstream 405600 16547281 ~ 16548567 (-)
LOC120560423 rasa1 coding upstream 880857 17022538 ~ 17055682 (-)
LOC120560528 vcan,LOC102793126 coding upstream 1340959 17482640 ~ 17535168 (-)
G61998 NA non-coding downstream 16844 16096421 ~ 16100383 (-)
G61996 NA non-coding downstream 133816 15982876 ~ 15983411 (-)
G61993 NA non-coding downstream 177979 15937976 ~ 15939248 (-)
G61956 NA non-coding downstream 340089 15773679 ~ 15777138 (-)
LOC120560849 NA non-coding downstream 572876 15541832 ~ 15544351 (-)
G62065 NA non-coding upstream 363589 16505270 ~ 16506122 (-)
LOC120561369 NA non-coding upstream 365365 16507046 ~ 16508251 (-)
LOC120561239 NA non-coding upstream 421789 16563470 ~ 16564460 (-)
G62103 NA non-coding upstream 467892 16609573 ~ 16663861 (-)
G62104 NA non-coding upstream 468796 16610477 ~ 16620203 (-)
LOC120560838 NA other downstream 714903 15369026 ~ 15402324 (-)
mfsd14bb LOC103398013,LOC102210719 other downstream 839043 15252615 ~ 15278184 (-)
LOC120560831 NA other downstream 884534 15224970 ~ 15232693 (-)
sdhaf1 sdhaf1,LOC102800057 other downstream 898805 15216550 ~ 15218422 (-)
tti2 tti2 other downstream 1075847 15029876 ~ 15041380 (-)
LOC120560105 LOC103362503 other upstream 10739 16152420 ~ 16452488 (-)
G62064 NA other upstream 362945 16504626 ~ 16505067 (-)
LOC120561322 NA other upstream 406936 16548617 ~ 16551175 (-)
LOC120560425 NA other upstream 941798 17083479 ~ 17085821 (-)
G62194 NA other upstream 982315 17123996 ~ 17124477 (-)

Expression


Co-expression Network