G62033 (aqp3,LOC103362379,LOC107393848,LOC105031174)


Basic Information

Item Value
gene id G62033
gene name aqp3,LOC103362379,LOC107393848,LOC105031174
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 16512171 ~ 16514043 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU83073
aaaaagagaagTTTATTGtattagttcaaaaacatttcCCCTCAACCTACATACAATGGACCAAGGTGCTCACACGGTCCAGTTCAGCACCCATCTTGGAGTCCAGGTATGAGCACACCAAAAGGCCTAACTAACAATTTGAAGACAGGTAGTTAATATTGTGCTGTACATAGAATATCATTGTGATTTGTTAACACAAATCTGAGAAGTTTtagttcagttttttattttgcacaatttaaaatgacaaatgaaaCGAACATAACATGATGTACAGTGCCGGAAGAGGCAGAAAACCCAATGAGTTTATTTGAAGCCTCCACctaaataatgttaaaatttCACAATTTGATAAAGAACAGAAAATGTACATACAGAACAGAATATAACTACATAATAGTGATGGAAACGTAATAATCAAAtatatgaagtaaaaaaaaatatcaaaaataaaaacagaaaatatgagTTTTAGATGATGTATGATTATGGAGTACAATACATGGGGAAAAAGCAATTACAAAACAGCAGTTAcactttttgtaacattttatagaggactttttttttgctaGGAGAGAAAAAGCCATTCCCTAATTGTTTACCCCTAAATATTATGGAAAATTTGGAGAGTATGGAGATCAGAAGATATTTCCAAGCATGAAAGcatggttctttcagggaatgattgtaaagatttacaaagaatatgtggAGGGGCAGACCTTACTTCACAGCGCTATGGAGATTTGTGGAGgtttggcaatgcaagactatacaAAGGGTAAATGATCAAGTTTTCTAGTTGATGGAATATCACAATAAAATATTCTTCAATATTTGAACTTTTACATTGAATTTTGGATTCTTTATTTCCCAGTTTCCCCAAATTTAAATGTGAGATTCAGTGAAAGGTTCTGGACTGACAAAATGCATACCTGTAGACATTGGTTGCGAAAGACGTTCATCTGTCAACATAAAAGTTATATAAAACTAAATTGGTATAAAGcatacaatactgttcaaactGGAGTGCTATAGACTCTAAGAGCCAAATGTACATCTCCTAAAATAATTAATGGAATTCTGGGTTTCTGAAGTTGTGTTTCGCCCCTCTATACTCACACTCAATTCTTCTACATATAATCCAATTACATTATAATGTAAAGATAGTGGCCTTAGGCGATACCCCAACAGTGTGCTGTTACAGTGTGCTGTTGGGGGTAtctgctgtgtgttggtattTACAGAAGGTGCATGTGTTAGAGTCGTTAGCTCTCTAACACACTCAGTGTATTTCTTTGGCATTGTCTTTGGTTTTATCGTTGGTGGTGACATTGGTAAGTCGGACACTCTCTTCTATTGCGATTTTCTGGTCACGTGCTTCTCCCTCCGTATGGAAGCCAACCATCAGCTGGTAGATAAACGCACCGATGAAGCTGCCAAAGAATGGGGCAAAAATGGGTACCAGGAACCAGCCGTTTCCAGCCGTGAAAACTTCGCCGCCCCACCCAGCCATAGCGGTGAAAAGACGTGGTCCGAAGTCTCGAGCAGGATTGACAGCATAGCCAGAGTTAAAGCCCATAGACAATCCAATGACCAGAACTACAAATCCCACAGTGAAGGCCTCTAGCCCTTGGGGGATGGGGTTGTTGTATGGATCCACAATAGCCAGGATACAAACAATGAGCGCTGCTGTGCCGATCAT

Function

symbol description
aqp3 Enables glycerol channel activity; identical protein binding activity; and water channel activity. Involved in several processes, including glycerol transport; response to retinoic acid; and water transport. Acts upstream of or within cellular response to hypoxia. Located in several cellular components, including cell-cell junction; nucleoplasm; and plasma membrane.

NR:

description
PREDICTED: aquaporin-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83073 True 1708 lncRNA 0.38 2 16512171 16514043

Neighbor

gene id symbol gene type direction distance location
LOC120561368 LOC104951926 coding upstream 7435 16495235 ~ 16504736 (+)
LOC120561387 NA coding upstream 19536 16487394 ~ 16492635 (+)
LOC120561386 NA coding upstream 28142 16477498 ~ 16484029 (+)
LOC120561380 NA coding upstream 44195 16461238 ~ 16467976 (+)
kiaa0825 kiaa0825 coding upstream 573318 15811685 ~ 15938853 (+)
LOC120560896 LOC103362386,LOC102790232,LOC102295658,LOC102208013 coding downstream 23083 16537126 ~ 16540185 (+)
wdr54 wdr54 coding downstream 36207 16550250 ~ 16554512 (+)
rhobtb4 LOC103362416,LOC103470451 coding downstream 58285 16572328 ~ 16616256 (+)
si:dkey-40c11.2 LOC104955420,LOC104955419 coding downstream 114478 16628521 ~ 16663697 (+)
mef2cb mef2c coding downstream 310772 16824815 ~ 16895188 (+)
G61975 NA non-coding upstream 313300 16123200 ~ 16198871 (+)
LOC120560394 NA non-coding upstream 369372 16134594 ~ 16142799 (+)
G61968 NA non-coding upstream 455466 16035451 ~ 16056705 (+)
G61970 NA non-coding upstream 461478 16048383 ~ 16050693 (+)
G61966 NA non-coding upstream 466333 15961601 ~ 16045838 (+)
G62082 NA non-coding downstream 53439 16567482 ~ 16567714 (+)
G62085 NA non-coding downstream 96434 16610477 ~ 16620136 (+)
LOC120560795 NA non-coding downstream 382545 16896588 ~ 16943176 (+)
G62126 NA non-coding downstream 438882 16952925 ~ 16953637 (+)
G62184 NA non-coding downstream 563860 17077903 ~ 17084516 (+)
LOC120560890 NA other upstream 36266 16468310 ~ 16475905 (+)
fam172a fam172a,LOC102785942 other upstream 412687 15943698 ~ 16099484 (+)
mctp1a mctp1,LOC102782783 other upstream 735030 15636798 ~ 15777141 (+)
LOC120560526 NA other upstream 979375 15518780 ~ 15532796 (+)
zgc:101664 NA other upstream 1077236 15431708 ~ 15434935 (+)
LOC120560897 LOC105925468 other downstream 18873 16532916 ~ 16534175 (+)
LOC120560947 edil3 other downstream 771605 17285648 ~ 17414595 (+)
tmem167a tmem167a,LOC103397084 other downstream 1053970 17568013 ~ 17572705 (+)
cmya5 cmya5,LOC106958347,LOC104953151 other downstream 1484643 17998686 ~ 18011030 (+)
thbs4a thbs4,LOC104953147,LOC106958346 other downstream 1501362 18015405 ~ 18029386 (+)

Expression


Co-expression Network