LOC120561322


Basic Information

Item Value
gene id LOC120561322
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 16548617 ~ 16551175 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU83119
TCCTCGGTTGCTGAGCAACCGTAGACTACACGGATAAGGctttatatatatctatgtatatGTCAATGGGATAAGGGTGTAACGTTACAAAGGAATGTGTATGCCTCTAAGCCAAGATGCCCCGCTCTGCAGCCAAGTCCCAAGCTGAGAAGCAAAGACCCAAGTCGTCTGTCCCAGTGAACACACCTCCAACGCCAGACCTGAAAGTGGAAGATATAATCCCTGGTCGCTTAACACAGGCCCAATGGACAGACATGTTGATCCGGGAGGATGCAGATGAGGCTGTGGCGGTGATCATAGAGGACGTGTTGAGCAAGGTCATGGAACGCTGTCTTagattaaaaattaaaagacaGCTAGTACCTTTCTCTGCATCCTGGGCCAAGAGATACCTCT
>TU83120
gttttttgttttaatttcaaattcagtgttttgaaaaacagtgccaacaaaacaaaaatggccCACTGTCCTGACGCATTCCGTCTCCACGTAAATTTAGAAAGAATATTAAAGGGGACTCAAGGACCACACTCACACCCTGTCCAACCTGCTCTCACTGTGAACAATAACAGCGGAAGACACTAAGAGCACACAGCAGAAGTTGCACTATGATGGCCTGACCTGCATGATGAGCGATGTGCTTGTGGCGACATTGGGCTCCTTGGACTGCAGCTGGCGGTGGGAATAGTTGAGGCCGTCCCAGGACGCGCTGACCATGTTGACCACGTTAGCATGGACCACCGTGAAGTAGCCTCTAAGCCAAGATGCCCCGCTCTGCAGCCAAGTCCCAAGCTGAGAAGCAAAGACCCAAGTCGTCTGTCCCAGTGAACACACCTCCAACGCCAGACCTGAAAGTGGAAGATATAATCCCTGGTCGCTTAACACAGGCCCAATGGACAGACATGTTGATCCGGGAGGATGCAGATGAGGCTGTGGCGGTGATCATAGAGGACGTGTTGAGCAAGGTCATGGAACGCTGTCTTagattaaaaattaaaagacaGCTAGTACCTTTCTCTGCATCCTGGGCCAAGAGATACCTCT
>TU83121
TCCTCGGTTGCTGAGCAACCGTAGACTACACGGATAAGGctttatatatatctatgtatatGTCAATGGGATAAGGGTGTAACGTTACAAAGGAATGTGTATGCCTCTAAGCCAAGATGCCCCGCTCTGCAGCCAAGTCCCAAGCTGAGAAGCAAAGACCCAAGTCGTCTGTCCCAGTGAACACACCTCCAACGCCAGACCTGAAAGTGGAAGATATAATCCCTGGTCGCTTAACACAGGCCCAATGGACAGACATGTTGATCCGGGAGGATGCAGATGAGGCTGTGGCGGTGATCATAGAGGACGTGTTGAGCAAGGTCATGGAACGCTGTCTTagattaaaaattaaaagacaGTACCTTTCTCTGCATCCTGGGCCAAGAGATACCTCT
>XR_005639585.1
GTCAGTCTAAGAGAAGAAAGTAAAGGGTCTGGTTAATAGATTAacaatttcataaaaaaaacactgttagcaTACTTCatccgcagcgctgtggggaTAGCTAGCTAGGACCTAGGAcaggcaatgcgagactagcagcAAGCTAACCTTGTTATGGTATCAAGAAACCAAATGCAATAACGCAGCGTAAATAAAATAGGACACCGTTACTTTTGTGAGACACATTGCACATACTATTGCTTTAGATTACATAACAATTGGTCCAGCCTCTATTGGCGCTGTCGTTGTCGACCCTTGCATATAAAGTTAACGTAAACGAAGCACCTTTTTAGCTCTTGTTAGCAACAGGATTACCTCCGCGTCGTCTGCAGCCATAGAGACAACGCCACTACTTCTACGTAAGACGTCATCCTTGCGTCCTCGGTTGCTGAGCAACCGTAGACTACACGGATAAGGctttatatatatctatgtatatGTCAATGGGATAAGGGTGTAACGTTACAAAGGAATGTGTATGCCTCTAAGCCAAGATGCCCCGCTCTGCAGCCAAGTCCCAAGCTGAGAAGCAAAGACCCAAGTCGTCTGTCCCAGTGAACACACCTCCAACGCCAGACCTGAAAGTGGAAGATATAATCCCTGGTCGCTTAACACAGGCCCAATGGACAGACATGTTGATCCGGGAGGATGCAGATGAGGCTGTGGCGGTGATCATAGAGGACGTGTTGAGCAAGGTCATGGAACGCTGTCTTagattaaaaattaaaagacaGCTAGTACCTTTCTCTGCATCCTGGGCCAAGAGATACCTCTACACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83119 False 396 TUCP 0.48 3 16548622 16550256
TU83120 False 645 TUCP 0.49 3 16548622 16551175
TU83121 False 392 TUCP 0.48 3 16548622 16550256
XR_005639585.1 True 818 lncRNA 0.45 3 16548617 16550673

Neighbor

gene id symbol gene type direction distance location
LOC120561320 NA coding downstream 50 16547281 ~ 16548567 (-)
nol6 nol6 coding downstream 2145 16531652 ~ 16546472 (-)
aqp3a LOC103362379,LOC108242818 coding downstream 29301 16512377 ~ 16519316 (-)
nr2f1a nr2f1,nr2f1a,LOC107671052 coding downstream 415671 16124488 ~ 16132946 (-)
slf1 slf1 coding downstream 737197 15777243 ~ 15811420 (-)
LOC120560423 rasa1 coding upstream 471363 17022538 ~ 17055682 (-)
LOC120560528 vcan,LOC102793126 coding upstream 931465 17482640 ~ 17535168 (-)
LOC120561237 NA coding upstream 1063966 17615141 ~ 17618859 (-)
f2r f2r,LOC100706519,LOC102798097 coding upstream 1163361 17714536 ~ 17718413 (-)
iqgap2 iqgap2 coding upstream 1167453 17718628 ~ 17755600 (-)
LOC120561369 NA non-coding downstream 40366 16507046 ~ 16508251 (-)
G62065 NA non-coding downstream 42495 16505270 ~ 16506122 (-)
G62001 NA non-coding downstream 406936 16117227 ~ 16141681 (-)
G61998 NA non-coding downstream 448234 16096421 ~ 16100383 (-)
G61996 NA non-coding downstream 565206 15982876 ~ 15983411 (-)
LOC120561239 NA non-coding upstream 12295 16563470 ~ 16564460 (-)
G62103 NA non-coding upstream 58398 16609573 ~ 16663861 (-)
G62104 NA non-coding upstream 59302 16610477 ~ 16620203 (-)
G62114 NA non-coding upstream 124517 16675692 ~ 16686359 (-)
LOC120560958 NA non-coding upstream 193110 16744285 ~ 16745598 (-)
G62064 NA other downstream 43550 16504626 ~ 16505067 (-)
LOC120560105 LOC103362503 other downstream 96129 16152420 ~ 16452488 (-)
LOC120560838 NA other downstream 1146293 15369026 ~ 15402324 (-)
mfsd14bb LOC103398013,LOC102210719 other downstream 1270433 15252615 ~ 15278184 (-)
LOC120560831 NA other downstream 1315924 15224970 ~ 15232693 (-)
LOC120560425 NA other upstream 532304 17083479 ~ 17085821 (-)
G62194 NA other upstream 572821 17123996 ~ 17124477 (-)
G62209 hapln1,LOC103373858,LOC106939955 other upstream 927131 17478306 ~ 17480814 (-)
LOC120560614 NA other upstream 983308 17534483 ~ 17568014 (-)
LOC120561236 LOC102290490,LOC106517513 other upstream 1046913 17598088 ~ 17605120 (-)

Expression


Co-expression Network