G62085


Basic Information

Item Value
gene id G62085
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 16610477 ~ 16620136 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU83132
agatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagattgtgTGAGACATGTGGTGTGTTCTGCCGCTCTCCATGGGAGGTGTGTTAAAGTCATGCTCGACTACCCAAATAGAAGTCAGATAGGATCTCACGAGACCCAAGTGAGAATTGAGCAGATTCCTTtctgaaaagagtgaaagtgGAGTAAACGTGAACTCAGTTTTAGTCAGCATTACATGCAACCCACATAATTTGGAATTACGCCACAGATATTTCAAAGTCATCCCAGTGCTTTGCTCTGggaatttaaaaattaaacccAAAGAGGTGCAAGTTGgcggacagttttttttatggaCTTCCATGGCCTCCTTTTAGTTTCCTATAGAATGGATGGCTAATAGATTTGTCTTATTGATAGTTGGTGTGACCCTAATAAGCTTCGTATCTTAATCTGTGTGCCTTATAGTTGGACAGAACTAAAAACTAGTTTGGGATTTTAGCAAACCTGCAGACAGGTTCTGCAGTGGTTGACATGATCGATAGAGTAAACAATCTCTATGATAATTTTAGAACTGTAAAACAGATTATGGTGTTGCTTTATGCACTCTCAGCCATTATCCttcttgagttttttttttttttttttttagcaaactgGAGCCATGCCAGCGAAGAATCTTTAGGCCTGCTGCTTGTTTTTATGGACGTACAAACGGCCTTAAATAAAACTCTTCGTAGACTGTAGTACAGTAGGTTGGTCTAATCATATAGCCTTGTGTAGTATGTTTTCTACAGTGGGAATTATTTGGATGTAAATGGACTCGCGCCTTGGTTCGGAAATCTCCACTGACCAGGTGATTTAGAGGTAGCAATTAAATTGACTAACAGGTTGATTCCTGTAATTTAACTTCAAACCACTGACTTTGGGAAAGCAAAGCTTTTTAAAGACCACTGGCTGGCCTGTGTGCTGGGAGAGTGCAACCACTTTGATGAAATGTGGTAAATTTGCATGGTGGCCTAACTTTGTCATTATAATGACACTTGGTGTTGGAATgtactttcttcttttttgtttttgactaTACCTTTCTGTGCTTAGCATGAATTATTCCTTATGTAAGATTTTTATTTAAACCTGATGATTGTAGCCTGATATTTCCACGAAGGTCTTTTCAAAATTCCCCCACAACTCAATAACATGAATAACATGACTTGTCCAGTTTCTTGTTTAAGGCCTAGTTGGCACTGAAGCCCACAGTAGCTCTCGTCTTGCTACTGTATGCGGCTTAATGCACAACTCAGTTTGCTATAAAAACTCAGCACAGCTCAAGGTAGCATCACTAATtatacaactttaaataatatgcTAGGATATTTGCTTGACAAAATAATGCAGATGATCTGTTGCAGCTGTGCGGCTGTTCCATTTATTCTGTTACTGTCGTTATTACAATCAATCAAGCTTATTCTTGGGATTTTTAAGATATTGGGAACAGGTCGTGAAACTTAAAATCgttaaaagtaaaattttaaTTGAAATCAACTATTGTAATGCACATATTTTAAGAATGTTCTAAATGGCTGAAAGCCAGGTGTAATGTTTGGGCTTTAGCCTGTTTCTGGGGTTACACAGAGGCTTCTGAATATCCAGAACTGTGTTCAGTGTTTCTTAACATTTGGTTGGGACCCTATCCGGGGTCACTTGGAATGCATATGGGGTGGTGggaaataaaactgaaatatttaATATGTATTACATTAAATACTGTAGgttttaaatatacagtatgtcctaaTCACTATAATACTTATTTGGATATTTGAACTTCCAGTTCACAACAACTTCAGTATTCTCTTATTATTGGTATAAATCATGGGCTGTAAAAGGTTGAGAAACCCTGAtatacagagagggagagatggagatgcCAAATTTTGAACCCTGTTAGCTTTATTCTGCCCTCAATATTTGCTCCACGCTGACCCCAACAGGCCAAAGTCACATTCTGATGTAGGATGTAGGGTTGTGTTGTTCATCTGGATTGTCTTGTTCTATCGTATCACATCCTTTTCACTGTCACATTCTCCTCATTTATTTGAGGTGGGGCTTTTCTTCCTTCTTAGCAGGCCTGACCTTCCTTTTTAAATGTGAGGCCTAGTGACTGAGAGAACACATTGTTTTTAGTCGTTGGTGTCTCCTTTCCTGTGCCTTCAGTGGAATCTCACTCTTTTGGCTCTGTACAGGCTGGCGGCAATGCACCTGCAGCCttctgggtttaaaaaaaaaataaaaaattgattaAGCCAAGAAAATACACAAGTGAGCACAGAAATAAAAGTAGGCAGCTTTCTTTAATGTACAGTATCTCAGCATAGTTACTGGCTATTTGGGTCATAGTGATAACTTCCAATGATAACGCATAACGTTCAGTATGTAATATCATCTATGCTAAAGCTACGCAACTTAAATTATGAAATGACCAAGAAACCCAGCAAACCAGCAGttttaaaacaatgttttcGCACTCTTTCAGGTGCCTGCACTTTCTATTATGTAGCCTAATACAACGTTTTTGATACGTATGCTAAGTCTTTATATTTACCAGTGTTCTTGATCACTTATCACTTTTCCAGTTTCTCATGATCTGTTTCTCAAATTCAGTAGTATACCCTATTGCTTCCACTATTTAGCTGCAATGTACTATGTTGCAATCATGCATGAAGTCAGTGCATTCTAAGTTGGGGGAGCAACATCTGGGGACTACTGTTTGGATTAAAGGCAGATATTAGCTATGACAACTATATATATTATGCTTTAATGAAGATAGTTGTAAATTATTTGAGAAAAGTTGAGTCACAGCTTGAATAACCTCTCACCTTAGAACTGCTCACCCTGCTGTATCTATTTGCTAGGCTGGTGTATACATAGGATTTTATGCGCAGAGAGACCCAGGACAGGGAGAGTGTTCATATAGACATACATGGTGTGATTAATCCCTGGTCTATACTGTAATTTTTAAGTGGAtcgtatatatactgtatagtatTGTTATGCACTTTTGTTTCCTTTGACTCATATGAGTTTTATTAACATTTACTGCTCATGGTATCGTGTTTATTacaataaaaaggcaaaagAAAGAGCACATCACACTCACAAACTATTAAGGGCtttcaagaaaataaaacaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83132 True 3224 lncRNA 0.37 2 16610477 16620136

Neighbor

gene id symbol gene type direction distance location
wdr54 wdr54 coding upstream 55965 16550250 ~ 16554512 (+)
LOC120560896 LOC103362386,LOC102790232,LOC102295658,LOC102208013 coding upstream 70292 16537126 ~ 16540185 (+)
LOC120561368 LOC104951926 coding upstream 105741 16495235 ~ 16504736 (+)
LOC120561387 NA coding upstream 117842 16487394 ~ 16492635 (+)
LOC120561386 NA coding upstream 126448 16477498 ~ 16484029 (+)
si:dkey-40c11.2 LOC104955420,LOC104955419 coding downstream 8385 16628521 ~ 16663697 (+)
mef2cb mef2c coding downstream 204679 16824815 ~ 16895188 (+)
tmem161b tmem161b coding downstream 339321 16959457 ~ 16978395 (+)
ccnh ccnh coding downstream 398441 17018577 ~ 17024968 (+)
LOC120561427 NA coding downstream 852127 17472263 ~ 17480557 (+)
G62082 NA non-coding upstream 42763 16567482 ~ 16567714 (+)
G62033 aqp3,LOC103362379,LOC107393848,LOC105031174 non-coding upstream 96434 16512171 ~ 16514043 (+)
G61975 NA non-coding upstream 411606 16123200 ~ 16198871 (+)
LOC120560394 NA non-coding upstream 467678 16134594 ~ 16142799 (+)
G61968 NA non-coding upstream 553772 16035451 ~ 16056705 (+)
LOC120560795 NA non-coding downstream 276452 16896588 ~ 16943176 (+)
G62126 NA non-coding downstream 332789 16952925 ~ 16953637 (+)
G62184 NA non-coding downstream 457767 17077903 ~ 17084516 (+)
G62186 NA non-coding downstream 471120 17091256 ~ 17091484 (+)
G62188 NA non-coding downstream 473233 17093369 ~ 17093740 (+)
LOC120560897 LOC105925468 other upstream 76302 16532916 ~ 16534175 (+)
LOC120560890 NA other upstream 134572 16468310 ~ 16475905 (+)
fam172a fam172a,LOC102785942 other upstream 510993 15943698 ~ 16099484 (+)
mctp1a mctp1,LOC102782783 other upstream 833336 15636798 ~ 15777141 (+)
LOC120560526 NA other upstream 1077681 15518780 ~ 15532796 (+)
LOC120560947 edil3 other downstream 665512 17285648 ~ 17414595 (+)
tmem167a tmem167a,LOC103397084 other downstream 947877 17568013 ~ 17572705 (+)
cmya5 cmya5,LOC106958347,LOC104953151 other downstream 1378550 17998686 ~ 18011030 (+)
thbs4a thbs4,LOC104953147,LOC106958346 other downstream 1395269 18015405 ~ 18029386 (+)
setbp1 setbp1,LOC102781608 other downstream 1454632 18074768 ~ 18129069 (+)

Expression


Co-expression Network