G62209 (hapln1,LOC103373858,LOC106939955)


Basic Information

Item Value
gene id G62209
gene name hapln1,LOC103373858,LOC106939955
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 17478306 ~ 17480814 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU83293
CTTTGTCTAACTTAAGGGTGGGCTGGCAGCCTGGCACTGAATAAGAAAAATGCCAAAGAATAAATGAATGTGAGGAGAGTCTAATCTTAAATCCTCTCAATGACATGGATTCATGCCAGATACATGGCCCCTAATTTGGCAACTTAAACAATACTATTTAAATCTCTGCTTAAACCTCTGTATCTTCACATAAAGCATGTTGATGTGGTTccagtgaaaataaaaaatgttattgttaaaaaagggacaacaattgattaaaagtcatattcTTTATTTCAAACTGCTTTGTTGAAAAAGGTACATGGTGATACGATACAAAAATACCTTTTTTAATGCACAAGTGTATACAAATGCACAAGTGTGAGAGacatttttaagttttgctTTTACATACAATGCATCACCATATTACTACAACCTGCAGTAAGTACCATATGTCAGTGCCCAGGGTTAGAAAAAGTCTAACACAAATATCATATTGTTTTGGTAACGGATACCTAAAAAGGTTGCTATCTTCTGATTATGGCACACCTTTAGATTAACAGCTCTGTATGTCCAAAACATGCTCACTGTGGTCCACAGGACACAATTGTTATGGTTTTCTgttggctttttattttttattcccaAACATGTATTCAGATCACTACAGCATAACTATTAGTGAATCCTTATTTAGGAGTGATCGTCAGTACTGCTCAGGTCTTTAAAACAATAGAGTGCTAGTGGAAATGTACCATTTACAGCTCACAACCTCAGTAAGAACTTGTGAAACTGTCACTGCAGTCATTGTGGATTTCAGCCCCAACATTTTTGCTACAACTGTCAAGACAAGACAATCACAGGTATGTTTTTAGAAAAAGGTTGTGTTCAGAACATTAAAAACCTAAAACTATAgtgacaaacataaaaaaaacataaaaatgttaaaacaaacaTACTGCATGAGGTTACAATATTTAAACTGTCTTTCAAATTGTAATTGGAAGTTGATCTGATGGGAGCTATCAATGCAGAAAAAGTCACAGTCCATTGATACATTTACATTCGTTTTCCTGTTAAACTGTAAATTTGATCACAACTCCTCAGGTTAAAAGAGAGAGGGATCCAGTTGAATACTTACTGCAGTAAAACACGGTTATATCCTTAGCTCAACAGTGGTAGTTATGTTCATGGCGTTGTTATCAATCTAAGGTGTTTTATTGATGTGATACTTGATACATGAATaacatgttacattgttttgttctttagatacattttaaagcagcaAATATCATCTGCACATGAGCAGAAGCGCTCTAAATCTTAAACTTCACACATCTAATCATTCTGTGGAAGTCAAATCAAACTTAGATCATGTTTTACAATCATCGTTCTGGTCTCTGTCATATCACTCATACATTAACACTGTTGCCTTTTCCCCAACAGTCTCTGTAAAATTAATCAATGCACAGttagagaaaaacaaaacttaaTGGCTACAAATATTTTGTCATTCATTGCATATGGAAGTaagatgtacagtatttgtttttaGAAGTTAAGGAGGGTTATCACAGTTTCAAAAAAGTATTGAGCTCATGCTAGCTAAGATCCAAAGCTTGTCTGCTTTATTGTGGATTTTATTGGTTGTGGTTGTTGCTGCTCTTTGGTGATTATGGCTTCCCTACTGCTACCTACCACCTCACTGCTAAGCCTTGTAGCAGTAGACGCCGTAAGACTTTTGCATCTTGTCTGGGAATCCAACAAAGCGCACTGCAGCTTCTGTGGGGCTGCAGTTCTTGCGGGGCCTGGCAATGGGGTAGCGCACACTTCCGTCAGCCAACCAGCCGGCATCGCAGCGATCGTAACCCTCGAGCTTCCAGGCGGAGTACATGTGACCCACCTTGGCAATTTCTGCACCATCGTCTATGCACGCCTGCACAGCCTCGTCAAAGGTCAGCCTGTCGGGCTGGACCAGCCAATAGAAATGTCCGTTGAGTTCAGAAGCAAAGCAGAACACGTCAAAGCGGCTTATTTGTTTGTCAGGACGGCCATAGCTTCTGACGCCAGGCCCGTGATTGGTGCCTCCACAATTCTGTCTGGGTTTGGTGATGGGATACTGTACTGTGCCATCATTCAGCCAGCCAGCATTGCACCAGTCCAGGCCGCCCTTCCAGGCCTCAAACAACTGGTCAAAGGTGGCGACAGAAGCATCCTGTCCTTGACAGGCCTGCACAGCTTTGGGGAAGTTCAGGTTGTAGCGGCCCACAGGGGGGGAGTATGGGAACACAACACC

Function

symbol description
hapln1 Predicted to enable hyaluronic acid binding activity. Predicted to be an extracellular matrix structural constituent conferring compression resistance. Predicted to be involved in central nervous system development and skeletal system development. Colocalizes with collagen-containing extracellular matrix.

NR:

description
PREDICTED: hyaluronan and proteoglycan link protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83293 True 2284 TUCP 0.40 2 17478306 17480814

Neighbor

gene id symbol gene type direction distance location
LOC120560423 rasa1 coding downstream 422624 17022538 ~ 17055682 (-)
LOC120561320 NA coding downstream 929739 16547281 ~ 16548567 (-)
nol6 nol6 coding downstream 931834 16531652 ~ 16546472 (-)
aqp3a LOC103362379,LOC108242818 coding downstream 958990 16512377 ~ 16519316 (-)
nr2f1a nr2f1,nr2f1a,LOC107671052 coding downstream 1345360 16124488 ~ 16132946 (-)
LOC120560528 vcan,LOC102793126 coding upstream 1826 17482640 ~ 17535168 (-)
LOC120561237 NA coding upstream 134327 17615141 ~ 17618859 (-)
f2r f2r,LOC100706519,LOC102798097 coding upstream 233722 17714536 ~ 17718413 (-)
iqgap2 iqgap2 coding upstream 237814 17718628 ~ 17755600 (-)
sv2ca sv2c,LOC103357064 coding upstream 278427 17759241 ~ 17792494 (-)
G62205 NA non-coding downstream 62960 17414652 ~ 17415346 (-)
G62183 NA non-coding downstream 411850 17065836 ~ 17066456 (-)
G62131 mef2c non-coding downstream 592357 16882821 ~ 16885949 (-)
LOC120560320 NA non-coding downstream 643019 16821805 ~ 16835287 (-)
G62130 NA non-coding downstream 656612 16821072 ~ 16821694 (-)
G62230 NA non-coding upstream 94827 17575641 ~ 17575949 (-)
G62231 NA non-coding upstream 95405 17576219 ~ 17576552 (-)
G62318 NA non-coding upstream 360905 17841719 ~ 17842452 (-)
LOC120560086 NA non-coding upstream 415977 17896791 ~ 17899827 (-)
G62333 kif2a non-coding upstream 434112 17914926 ~ 17926955 (-)
G62194 NA other downstream 353829 17123996 ~ 17124477 (-)
LOC120560425 NA other downstream 392485 17083479 ~ 17085821 (-)
LOC120561322 NA other downstream 927131 16548617 ~ 16551175 (-)
G62064 NA other downstream 973239 16504626 ~ 16505067 (-)
LOC120560105 LOC103362503 other downstream 1025818 16152420 ~ 16452488 (-)
LOC120560614 NA other upstream 53669 17534483 ~ 17568014 (-)
LOC120561236 LOC102290490,LOC106517513 other upstream 117274 17598088 ~ 17605120 (-)
pip5k1bb pip5k1b,LOC104956915 other upstream 372592 17853406 ~ 17895897 (-)
LOC120560503 vcp,LOC102783844,LOC103357444,LOC107393925,LOC107552546 other upstream 806475 18287289 ~ 18296704 (-)
fancg fancg other upstream 816779 18297593 ~ 18303862 (-)

Expression


Co-expression Network