G62339


Basic Information

Item Value
gene id G62339
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 17931742 ~ 17933468 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU83475
TCAGTCTATTTATTTGGATAACTCATTATCACAAAAGCCGTTTAAATGAAACACATGAATCTTTATTACGTCATCCAGCATTACATCCGGTGCAAACACTGAGAAACAGAACCATCGGGAGATCGGTGGTCTTCACTATACATTTATTGATAGCAGTTTTTTCTAGTTTCAGTTTTATAACAAAGTGTTAAATGGGTGgaaaacatgtttgtttttttacgttAAGTATGAGCTTTTAAGTCAGTGGCCACGTAGAACGACATGGCACAAACTGAAGTAAACTACATGTAAAAACCTCTCAGGGACACAGGGAAAAGAACACAATGTGGTTAAAGGCTTCTTCCATTCTGGCAAAAGCTCTgagaaggaagaaagagaagagaccACTTGTAatgaaataactttacaatgtcaACGGAGGACCTAGAAGCATGGAAACTGAGGACAGTGGCGTACATAAGCTTTCACACAGAGTGCACATGCAGACATGTCAGCCAGAAATCAAATACTGGTTTTGTGCAGTTAAACCTTAAAAACATATTCAATGAAGATCTCTTCTGAAACCAGGTCAAAGTATTCAGTTTAAAGAAAGTACAAAcaagtataaaaagaaaataatttaatgAGAACAGAGAGGGCAGACTAAACATTCTTcacaaaaggaaataaaactaTTTTCCTTCCTACGTTTTCTAGTGAGACCATAGTGGGGAACAGCCAGTTTTGTAAGGAGAGGGATCATAACAAATGCACCTTGAGCCTGTTGGTACATCAGAAAGTCCTTTTATTCGTATGTTCACAGCTGCTAGAGACAGCCTGAGTTGTGCCGAACATCTAGTGGTTATGCTTCTGTATGTGCCACTTAAATCTCTTCAGCCTCTAAAGAGCACGTGGCCTTTTGGGATTGATCTGCTTACTGGCTTGCTCCTCCTCCTGGAGTGTAGAGCGGAATGACTTCACTTTATCTCGGAGCTCGGTGAGGATATCTATCTTCTGGTCGAGGATCTGCTCCAGTTGAGTGGCGTACGACTCCACATCATAATCCACCTCCTCGGTCATCTCCAGCAGCACCTTCTCATCTTCCAGCCACCGGATGGACTCCTGCTCACAGAGGACACATACGAGTGCATATTCAGTGTATGACAGGTGGAGATGAAATCGTGCCAGAAGCACAGAAGAATGTCCTCTTAGATTTTACAGCCTTCACACAGATGGTACCAGTCCATTTGTTAGAAGGGTTACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83475 True 1243 lncRNA 0.41 2 17931742 17933468

Neighbor

gene id symbol gene type direction distance location
unc45b NA coding downstream 22026 17900473 ~ 17909716 (-)
polk LOC102794864,LOC106580482,LOC107579148 coding downstream 106999 17815832 ~ 17824743 (-)
ankdd1b ankdd1b,LOC104956917 coding downstream 116470 17810049 ~ 17815272 (-)
sv2ca sv2c,LOC103357064 coding downstream 139248 17759241 ~ 17792494 (-)
iqgap2 iqgap2 coding downstream 176142 17718628 ~ 17755600 (-)
dimt1l dimt1 coding upstream 1908 17935376 ~ 17940540 (-)
cenph NA coding upstream 7134 17940602 ~ 17944550 (-)
trnaq-cug_5 NA coding upstream 26345 17959813 ~ 17959884 (-)
homer1b homer1,LOC103357082,LOC107393910,LOC100694084,LOC108234609,LOC101486274,LOC104943385,LOC103470410,LOC102304452,LOC103397200,LOC106921283,LOC102231851 coding upstream 34110 17967578 ~ 17988335 (-)
mtx3 mtx3 coding upstream 78834 18012302 ~ 18017408 (-)
G62333 kif2a non-coding downstream 4787 17914926 ~ 17926955 (-)
LOC120560086 NA non-coding downstream 31915 17896791 ~ 17899827 (-)
G62318 NA non-coding downstream 89290 17841719 ~ 17842452 (-)
G62231 NA non-coding downstream 355190 17576219 ~ 17576552 (-)
G62230 NA non-coding downstream 355793 17575641 ~ 17575949 (-)
G62399 NA non-coding upstream 121783 18055251 ~ 18056143 (-)
G62452 riok2 non-coding upstream 301137 18234605 ~ 18235686 (-)
G62493 NA non-coding upstream 370689 18304157 ~ 18304356 (-)
G62567 NA non-coding upstream 396135 18329603 ~ 18329892 (-)
G62568 NA non-coding upstream 397916 18331384 ~ 18332396 (-)
pip5k1bb pip5k1b,LOC104956915 other downstream 35845 17853406 ~ 17895897 (-)
LOC120561236 LOC102290490,LOC106517513 other downstream 326622 17598088 ~ 17605120 (-)
LOC120560614 NA other downstream 363728 17534483 ~ 17568014 (-)
G62209 hapln1,LOC103373858,LOC106939955 other downstream 450928 17478306 ~ 17480814 (-)
G62194 NA other downstream 807265 17123996 ~ 17124477 (-)
LOC120560503 vcp,LOC102783844,LOC103357444,LOC107393925,LOC107552546 other upstream 353821 18287289 ~ 18296704 (-)
fancg fancg other upstream 364125 18297593 ~ 18303862 (-)
G62580 tacc1,LOC101470878,LOC102206806 other upstream 444134 18377602 ~ 18380502 (-)
G62582 LOC106098714,LOC103357453,LOC102788116 other upstream 449537 18383005 ~ 18386269 (-)
iqcd NA other upstream 504208 18437676 ~ 18443018 (-)

Expression


Co-expression Network