G62399


Basic Information

Item Value
gene id G62399
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 18055251 ~ 18056143 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU83567
CAGCTATAATGAAGAAGAAGCTCATTTTCTGACCAGATGAGACCGGGTTAATCAGATGATCACCATTTTCACACCATTGCGTGGGTCAGCTACCCGGCGTTGCTCACAATCGTCCACTggaattggggggggggggaagatgTCCAGCGGAGGCAAAAAGGCTCAGATGTGGTTGACTTTAGGACATTTTAGAGGTTTTAGATGTTAAATCAGTTGAGAATTGTGTCTAAGTTTTGCTCTACCTGTCCAaggtgctgctgtgtgtgtagcATCCCATCAACTGATGTACAACAGAAGTCAATAGTGTTGGCTTTGGTCTTTCTTCATTGTAACAATGATGCCTAAGCTCTGGGAGCCTGTtgtaatatgtatatttatgtgactgaaaataagaacaaccaaCCAAACAAGCATGCCTGATTTATTTCATGTACTGTGAATGTTATTGAATGGTGCAAATGCATAGAACCCTGACAGGATGAAGCAGGACACAGAGGGGTCTTAAATTAGGCTATACAAGCAATACATAGCAACGGTCTGCTATACAGAAGTAACAGACCATAATGCCGTGATTGGCCACTCAGAATTGAGTATTCATCAA
>TU83570
acagtttagtgGATTGTGGTATAGGGTATGTTTTACTGAAGGAGGACCTTGGTGTTACTGGGAGGTTCAAAGCTCTTCCAGCTCCTCCTGTGGTTTGGAAAATATCTGGGTTGACTACGCTATGCTACAGTATGTTTATGGAGAGAATTTCCAAATACTTACAGTAGACGGAACTTAAGTGCTTATCAGATTGCTTATGATAGACTTGTTTTACTTGCACATGTAGTGGAGATACAGTGTTTGACTGTATTGTTTCAATTATTCTTTTTTGTAACAACCGCTTTTGTATTTTCAGCTATAATGAAGAAGAAGCTCATTTTCTGACCAGATGAGACCGGGTTAATCAGATGATCACCATTTTCACACCATTGCGTGGGTCAGCTACCCGGCGTTGCTCACAATCGTCCACTggaattggggggggggggaagatgTCCAGCGGAGGCAAAAAGGCTCAGATGTGGTTGACTTTAGGACATTTTAGAGGTTTTAGATGTTAAATCAGTTGAGAATTGTGTCTAAGTTTTGCTCTACCTGTCCAaggtgctgctgtgtgtgtagcATCCCATCAACTGATGTACAACAGAAGTCAATAGTGTTGGCTTTGGTCTTTCTTCATTGTAACAATGATGCCTAAGCTCTGGGAGCCTGTtgtaatatgtatatttatgtgactgaaaataagaacaaccaaCCAAACAAGCATGCCTGATTTATTTCATGTACTGTGAATGTTATTGAATGGTGCAAATGCATAGAACCCTGACAGGATGAAGCAGGACACAGAGGGGTCTTAAATTAGGCTATACAAGCAATACATAGCAACGGTCTGCTATACAGAAGTAACAGACCATAATGCCGTGATTGGCCACTCAGAATTGAGTATTCATCAA

Function

GO: NA

KEGG:

id description
ko03013 Nucleocytoplasmic transport
ko03015 mRNA surveillance pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU83567 False 601 lncRNA 0.43 1 18055251 18055851
TU83570 True 893 lncRNA 0.41 1 18055251 18056143

Neighbor

gene id symbol gene type direction distance location
serinc5 serinc5,LOC102781024 coding downstream 4794 18029439 ~ 18050457 (-)
mtx3 mtx3 coding downstream 37843 18012302 ~ 18017408 (-)
homer1b homer1,LOC103357082,LOC107393910,LOC100694084,LOC108234609,LOC101486274,LOC104943385,LOC103470410,LOC102304452,LOC103397200,LOC106921283,LOC102231851 coding downstream 66916 17967578 ~ 17988335 (-)
trnaq-cug_5 NA coding downstream 95367 17959813 ~ 17959884 (-)
cenph NA coding downstream 110701 17940602 ~ 17944550 (-)
cdk7 cdk7 coding upstream 3417 18059560 ~ 18065397 (-)
LOC120560293 lnpep coding upstream 90977 18147120 ~ 18162327 (-)
erap2 erap2,LOC104943769,LOC100692736,LOC102782494 coding upstream 106963 18163106 ~ 18170758 (-)
rgmb rgmb,LOC104943770 coding upstream 117300 18173443 ~ 18182905 (-)
thoc5 thoc5 coding upstream 257232 18313375 ~ 18321149 (-)
G62339 NA non-coding downstream 121783 17931742 ~ 17933468 (-)
G62333 kif2a non-coding downstream 128296 17914926 ~ 17926955 (-)
LOC120560086 NA non-coding downstream 155424 17896791 ~ 17899827 (-)
G62318 NA non-coding downstream 212799 17841719 ~ 17842452 (-)
G62231 NA non-coding downstream 478699 17576219 ~ 17576552 (-)
G62452 riok2 non-coding upstream 178462 18234605 ~ 18235686 (-)
G62493 NA non-coding upstream 248014 18304157 ~ 18304356 (-)
G62567 NA non-coding upstream 273460 18329603 ~ 18329892 (-)
G62568 NA non-coding upstream 275241 18331384 ~ 18332396 (-)
G62571 NA non-coding upstream 299099 18355242 ~ 18357753 (-)
pip5k1bb pip5k1b,LOC104956915 other downstream 159354 17853406 ~ 17895897 (-)
LOC120561236 LOC102290490,LOC106517513 other downstream 450131 17598088 ~ 17605120 (-)
LOC120560614 NA other downstream 487237 17534483 ~ 17568014 (-)
G62209 hapln1,LOC103373858,LOC106939955 other downstream 574437 17478306 ~ 17480814 (-)
G62194 NA other downstream 930774 17123996 ~ 17124477 (-)
LOC120560503 vcp,LOC102783844,LOC103357444,LOC107393925,LOC107552546 other upstream 231146 18287289 ~ 18296704 (-)
fancg fancg other upstream 241450 18297593 ~ 18303862 (-)
G62580 tacc1,LOC101470878,LOC102206806 other upstream 321459 18377602 ~ 18380502 (-)
G62582 LOC106098714,LOC103357453,LOC102788116 other upstream 326862 18383005 ~ 18386269 (-)
iqcd NA other upstream 381533 18437676 ~ 18443018 (-)

Expression


Co-expression Network