G62540


Basic Information

Item Value
gene id G62540
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 18457498 ~ 18459249 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU83749
CTTTAGTACTTTGAGGACTCTCCAGCTCCATGATTTCCTCCTCCACTTCCTGTTGTCCACTGGGTTCAGGGAGCTCAGCAGGATCTTAATCGTGGACTCGGAGTAAGGAAGAAGCGGCCTGTACTCCgactctgaaaCATACTCCTGTTGGATGGTTCCTCCAGTCAGGCAGGGAACTTCATCATCAGACGAGTCAGATGAGTTAAACTCTGCTGCAAAGACAAATAATATCATCACTGGCAATTGTGgaaacatatttttaatttgtgtgtgtatgaatttgTGTTTCAACCTGGAATAGGAGCAACGTTCATCGAATGTTTCTGCCGGTTGTAGATGTATGCGCTGATGATAACAGTCAACACATACACCACATAGAGGCCCAAGTACCCTAGTTTCTCCCAGTGTCGTGGTTCCTCTGTACAACATAAGGAAAGTCCAAAACACTGCCGCCATGTAAAAGATGACATCACGCAGAAATGGACGGGAGGCCACAGCGAAAGGCTTGACCAGGGCCACGCTGCCAGCAACTACTGTGGTGACAAATATACCAGCTCCTGTGAAGGGGAGGGAACAAGATCAACCAGGTTTCCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83749 True 595 lncRNA 0.47 3 18457498 18459249

Neighbor

gene id symbol gene type direction distance location
cfap73 NA coding upstream 20308 18432817 ~ 18437190 (+)
si:ch211-204d2.4 plekha2 coding upstream 56757 18389111 ~ 18400741 (+)
si:ch211-113d22.2 LOC106098714,LOC103357453,LOC102788116 coding upstream 71245 18382949 ~ 18386253 (+)
LOC120560725 NA coding upstream 74903 18365745 ~ 18382595 (+)
ddhd2 ddhd2 coding upstream 99866 18345554 ~ 18357632 (+)
si:dkey-98f17.5 LOC103357465,LOC102303189,LOC102202618,LOC102793122,LOC101475617 coding downstream 115739 18574988 ~ 18587715 (+)
p2rx2 p2rx2 coding downstream 178445 18637694 ~ 18642437 (+)
myo1ha myo1h,LOC104945027,LOC102796924 coding downstream 244883 18704132 ~ 18715310 (+)
ube3b ube3b coding downstream 261485 18720734 ~ 18729940 (+)
aldh3b2 LOC103470338,LOC103357480,LOC106944551,LOC103142889,LOC106918406,LOC107097252,LOC101157544,LOC100709454,LOC102306236,LOC104945033,LOC105926931,LOC108234466 coding downstream 270967 18730216 ~ 18736475 (+)
G62533 NA non-coding upstream 69013 18365280 ~ 18388485 (+)
G62508 NA non-coding upstream 136340 18320643 ~ 18321158 (+)
G62502 thoc5 non-coding upstream 142721 18313211 ~ 18314777 (+)
G62484 vcp,LOC102783844,LOC103357444,LOC107746855,LOC107393925 non-coding upstream 160595 18293260 ~ 18296903 (+)
G62406 NA non-coding upstream 329753 18127536 ~ 18127745 (+)
G62557 NA non-coding downstream 38714 18497963 ~ 18498301 (+)
G62558 NA non-coding downstream 39381 18498630 ~ 18498972 (+)
G62532 NA non-coding downstream 40629 18499878 ~ 18500121 (+)
G62559 NA non-coding downstream 40876 18500125 ~ 18500506 (+)
G62560 NA non-coding downstream 42513 18501762 ~ 18502375 (+)
tbx5b tbx5,LOC103470367 other upstream 37908 18407348 ~ 18419590 (+)
G62513 NA other upstream 126268 18330705 ~ 18331230 (+)
setbp1 setbp1,LOC102781608 other upstream 328429 18074768 ~ 18129069 (+)
thbs4a thbs4,LOC104953147,LOC106958346 other upstream 428112 18015405 ~ 18029386 (+)
cmya5 cmya5,LOC106958347,LOC104953151 other upstream 446468 17998686 ~ 18011030 (+)
acacb acacb other downstream 201908 18661157 ~ 18685463 (+)
mvk mvk,LOC102798305 other downstream 278269 18737518 ~ 18742399 (+)
tmem119a LOC103353570,LOC104946818 other downstream 617312 19076561 ~ 19081654 (+)
rasl10a rasl10a other downstream 971152 19430401 ~ 19448950 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other downstream 1300347 19759596 ~ 19763524 (+)

Expression


Co-expression Network