G62559


Basic Information

Item Value
gene id G62559
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 18500125 ~ 18500506 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU83772
AAGGGATCTAACCTGGTTCTGGTTTGGCtgccacaaacacccccacaggTGCCCACTCCAAATACagtgggatgtggtggaactaCGGTTTTCGGAGATACAGTCAGTACAGTAAACGCGTTTAAAGTGCCTGAAACATATGCTGCATGTGCAGGTTTTGCTGGTATGAAGCTATACACACCTTGCTGTAGGCCAGCCGAGTGAATGCTCGTTTCGCCTCCGTTGGCTCTAGGAACTCGATAATGGCGGTGAGGCCTGAGGGCGGCAGCAGTACTCGGCCCAAAGAGCCATGAGGTGAGAAAAGCTCCTCTAACTCTGATGCCGTCACTTCAGCTGGAAGGTTTTTCACCAGGACGACAGTTGTACTCCTCGCTGCTGCAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83772 True 382 lncRNA 0.53 1 18500125 18500506

Neighbor

gene id symbol gene type direction distance location
cfap73 NA coding upstream 62935 18432817 ~ 18437190 (+)
si:ch211-204d2.4 plekha2 coding upstream 99384 18389111 ~ 18400741 (+)
si:ch211-113d22.2 LOC106098714,LOC103357453,LOC102788116 coding upstream 113872 18382949 ~ 18386253 (+)
LOC120560725 NA coding upstream 117530 18365745 ~ 18382595 (+)
ddhd2 ddhd2 coding upstream 142493 18345554 ~ 18357632 (+)
si:dkey-98f17.5 LOC103357465,LOC102303189,LOC102202618,LOC102793122,LOC101475617 coding downstream 74482 18574988 ~ 18587715 (+)
p2rx2 p2rx2 coding downstream 137188 18637694 ~ 18642437 (+)
myo1ha myo1h,LOC104945027,LOC102796924 coding downstream 203626 18704132 ~ 18715310 (+)
ube3b ube3b coding downstream 220228 18720734 ~ 18729940 (+)
aldh3b2 LOC103470338,LOC103357480,LOC106944551,LOC103142889,LOC106918406,LOC107097252,LOC101157544,LOC100709454,LOC102306236,LOC104945033,LOC105926931,LOC108234466 coding downstream 229710 18730216 ~ 18736475 (+)
G62532 NA non-coding upstream 4 18499878 ~ 18500121 (+)
G62558 NA non-coding upstream 1153 18498630 ~ 18498972 (+)
G62557 NA non-coding upstream 1824 18497963 ~ 18498301 (+)
G62540 NA non-coding upstream 40876 18457498 ~ 18459249 (+)
G62533 NA non-coding upstream 111640 18365280 ~ 18388485 (+)
G62560 NA non-coding downstream 1256 18501762 ~ 18502375 (+)
G62613 NA non-coding downstream 30504 18531010 ~ 18531311 (+)
G62656 lztr1 non-coding downstream 116568 18617074 ~ 18617569 (+)
G62667 NA non-coding downstream 136220 18636726 ~ 18637221 (+)
G62732 NA non-coding downstream 246984 18747490 ~ 18748496 (+)
tpcn1 tpcn1 other upstream 25394 18441347 ~ 18474731 (+)
tbx5b tbx5,LOC103470367 other upstream 80535 18407348 ~ 18419590 (+)
G62513 NA other upstream 168895 18330705 ~ 18331230 (+)
setbp1 setbp1,LOC102781608 other upstream 371056 18074768 ~ 18129069 (+)
thbs4a thbs4,LOC104953147,LOC106958346 other upstream 470739 18015405 ~ 18029386 (+)
acacb acacb other downstream 160651 18661157 ~ 18685463 (+)
mvk mvk,LOC102798305 other downstream 237012 18737518 ~ 18742399 (+)
tmem119a LOC103353570,LOC104946818 other downstream 576055 19076561 ~ 19081654 (+)
rasl10a rasl10a other downstream 929895 19430401 ~ 19448950 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other downstream 1259090 19759596 ~ 19763524 (+)

Expression


Co-expression Network