G62582 (LOC106098714,LOC103357453,LOC102788116)


Basic Information

Item Value
gene id G62582
gene name LOC106098714,LOC103357453,LOC102788116
gene type unknown
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 18383005 ~ 18386269 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU83799
cgtACACAGACATAAATAAGGGTGTGATTGTGTCTTTTATCAGACAAGcttgcatgcacacaaaaattAAGCACTAAACACATCATTAACATATTTAAACAATTCATGAAGATTGTGATGTTATATGTTAAATACTTTACTTTCTGGTAACCATTTTAACAACCCAAGTGAATAATGTGGTTCTATGGCATCAAGTGAGCTGCACACCAGCTACCCACTGAGGCACCCTAGCACCTACCGAAACCACACCTGCTTTAATAAAAACCATGGCTAAGTCTACTTCACTTTGCGCACACGTATTCACCACAAACACTCTTAAAACTTGAAATCACCTGAAAGTGAACATACCACTATAGATAATCGATAGATAATGAGGTTGCTATTCAAGTTCTTGATGAtaattgataataataataaaaatgacacAATTAAAGTGCTGAAACTTGTATTTATGGGACAGACATCCTTCACTTCACCAACAGTCATCAGAAAccaattttttgttgttgtcttaaACCACGGGAAATCTATGCCACTTAAATCCTTTTCGTAAACTTGGATTGAAAATCTCTGAGGGGTACAGAGTGACAAAGAGGAGAAGGTGGATGGATGACAACCCAGCAAATGAGGATGAATGAATTCCTGGAGGAAAGAAAAGTGGAGGTGTTTACAGCTGACTGACGGCCACACGCAGCAGCAGGGCCGTGATCAGCAGGACAGGGCTGGAGGCCACAGCCCCTGCGCCGTTGCGATGGTGATCCCCATGGCTGTGGCTCCGGTGGGGCCCATTACAGTCGTCGCCAAAACAGCAGTCCATCTTTGCTCCGGAGCTGACGCCATGAGCCTTGTCGCAGAAAGCCTTGTACGTGCACGACTTCATCACGGTGCTGGGTCCTGTGATGGTGGAGCAGGCGTCAGCGTACTGAGGGCAGGAGGTGGAGCCCTGTCGATTACAGTCGTCATCATTGGACGCCACGCACGTGTGACATTTGAGGGTGTGGCTGTGGCAGGCCAGAGAGATGAGCAGCAGCAGGACCAGGGCAGTCTTCATGGCAGCTGGCCAATGGTCACTGCGTCTTCCAGAATCC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106098714

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83799 True 1088 TUCP 0.46 3 18383005 18386269

Neighbor

gene id symbol gene type direction distance location
si:ch211-166a6.5 LOC104947816 coding downstream 38482 18333094 ~ 18344523 (-)
tfip11 tfip11,LOC102785266 coding downstream 56087 18321554 ~ 18326918 (-)
thoc5 thoc5 coding downstream 61856 18313375 ~ 18321149 (-)
rgmb rgmb,LOC104943770 coding downstream 200100 18173443 ~ 18182905 (-)
erap2 erap2,LOC104943769,LOC100692736,LOC102782494 coding downstream 212247 18163106 ~ 18170758 (-)
slc8b1 slc8b1 coding upstream 68958 18455227 ~ 18462329 (-)
LOC120560133 LOC103357459,LOC104947821 coding upstream 76934 18463203 ~ 18469696 (-)
morc2 morc2 coding upstream 83886 18470155 ~ 18487380 (-)
plbd2 plbd2 coding upstream 106473 18492742 ~ 18497861 (-)
LOC120560136 rbm19 coding upstream 111694 18497963 ~ 18504897 (-)
G62571 NA non-coding downstream 25252 18355242 ~ 18357753 (-)
G62568 NA non-coding downstream 50609 18331384 ~ 18332396 (-)
G62567 NA non-coding downstream 53113 18329603 ~ 18329892 (-)
G62493 NA non-coding downstream 78649 18304157 ~ 18304356 (-)
G62452 riok2 non-coding downstream 147319 18234605 ~ 18235686 (-)
G62586 plekha2 non-coding upstream 8567 18394836 ~ 18397946 (-)
G62629 NA non-coding upstream 135295 18521564 ~ 18521875 (-)
G62630 NA non-coding upstream 148664 18534933 ~ 18535281 (-)
G62625 NA non-coding upstream 152857 18539126 ~ 18540015 (-)
G62733 NA non-coding upstream 360924 18747193 ~ 18748609 (-)
G62580 tacc1,LOC101470878,LOC102206806 other downstream 2503 18377602 ~ 18380502 (-)
fancg fancg other downstream 79143 18297593 ~ 18303862 (-)
LOC120560503 vcp,LOC102783844,LOC103357444,LOC107393925,LOC107552546 other downstream 86301 18287289 ~ 18296704 (-)
pip5k1bb pip5k1b,LOC104956915 other downstream 487108 17853406 ~ 17895897 (-)
LOC120561236 LOC102290490,LOC106517513 other downstream 777885 17598088 ~ 17605120 (-)
iqcd NA other upstream 51407 18437676 ~ 18443018 (-)
zgc:158398 NA other upstream 101893 18488162 ~ 18492407 (-)
G62626 LOC103357464 other upstream 123886 18510155 ~ 18512261 (-)
mmab mmab other upstream 348639 18734908 ~ 18737406 (-)
ficd ficd other upstream 713975 19100244 ~ 19102474 (-)

Expression


Co-expression Network