G62836


Basic Information

Item Value
gene id G62836
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 19084934 ~ 19086862 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU84159
CAGAGCTTCATCAACCTACCGGATGAAAACAGACTTCACCAAAAAAAGCAGGACTTGTAAAGCCATtgttctcttttccttttcattCGTATTAATAAACTCACCGACTTCCCCTTCACCCACTCTGTTGCTAGAGAGCTGGAGGCAATGGCTGATCCACAGCCAAATGTCTTAAACTTTGCTTCAATAATCTTGCCATTTTCGTCCACCTGGATCTGGAGACGATATATGATCAAACACCTAGCTAGTTGTACAATAGTTGGACTGAATTTGACCTCCCAACTTACCTGAAGCTTCATTACATCACCACAGGCTGGTGCACCCACCAAACCAGTTCCCACGTTCTTGGAGTTTTTGTCTAGAGTTCCCACATTTCTTGGGTTTTCATAGTGGTCCACCACCTTTTTTGTGATATGAACAGAGAGCATTCAGCTCAGGGCTGAACAAACGTCTGCTCAATAACAACAGCGAGGACGCGGAGATTCGTAAAGACGCAATCGCCATGTTGGGTTACCGATGATGAACGGAAATCAACGAGTGAGGACGAGTGAGGACGACCACATTTTGTTGACAAACAAGTGAAGAAGGAAGGTATCACCAGGGTATCACCGATGAAGGAGCCCCTACTAGCGGCTAACAGTAGCTGTTACACCTGCAAGAGGCACTAGCTGTTCAGGCACAGACTccatccatggatgtattataccGACTCCAACTCTCACGATGTTAGGTTAGGTTACCAGTGTAGTGATGGC
>TU84161
tttttgtttggttttttttatatatattggcTCACAATAAGTACAAAGTCTCATACAATACTCTGTATATTGCTTTTGTATGTGTACTTTAGCTGTCGACCTAAATGCATGTTCATACTGAATCCACCATGTGGGACCAGTGATTTTATACAATCAAGCCAAAtaccaaaatatatatacatacaagaAAAACACATCTCAACTTAGTATCCGACTTATGATCTCATTTGTGTTCTGTGTAGGAAAGCACTGCAAAGTAAGAACAATGTTGAGTTTTCCATATTTAGATTTAAGGATCGGACTTCATTCACTACATTCAACATGAACTTCCCACTCCAAAATCAGCATTTAATAACCAACTTCTGATCAACACTAATAGCACCTTCCATTTTAAAGAGAATGTTAAACAGTATAAAACTCCCAGAAGAGGGTGCAATACCTGACGTTGTATTAGTAAACAATCTTCCAAACAGCACTGCAGTAAAACCTTAAAGGGCTGGTACTGAGACATAATGGATAGTTAATAACAAGATATTAACTGGTGGCGTGTACACGCTCCTCCTTCTTGTCCTGTTGTTTTAATCTGTAGTCTGACAGCGCTGCCTTTATGGCATCTTCTGCAAGCACTGAAAGAAAAGGAGTGAGGTTTTCAGACAAGCTTTAAGCATGAAATTAAGCTTTGATTTTACCAAGAAATATACAGCCTGGGTCAGTTAACAAATTATTGGAAAACCTGCACTGAAGGTGTTCTTGTGGCTCATATACCAACACCTTGCTGAGACACTTTTTCCCCTTTAACTTGTCAtccatctttatttttattaagcTTTCAGGGTGTGCGTGATAATAACACTGACTTGTGTTAGAAAGCACATTACACTGCTTCTATTCTTTAATTGTATTACTTTAAACTTACTGGAGCAATGAAGCTTGACTGGAGGAAGGCAGAGTTCTTTGGCAATGTCTGTGTTCCTGATCTTCAGAGCTTCATCAACCTACCGGATGAAAACAGACTTCACCAAAAAAAGCAGGACTTGTAAAGCCATtgttctcttttccttttcattCGTATTAATAAACTCACCGACTTCCCCTTCACCCACTCTGTTGCTAGAGAGCTGGAGGCAATGGCTGATCCACAGCCAAATGTCTTAAACTTTGCTTCAATAATCTTGCCATTTTCGTCCACCTGGATCTGGAGACGATATATGATCAAACACCTAGCTAGTTGTACAATAGTTGGACTGAATTTGACCTCCCAACTTACCTGAAGCTTCATTACATCACCACAGGCTGGTGCACCCACCAAACCAGTTCCCACGTTCTTGGAGTTTTTGTCTAGAGTTCCCACATTTCTTGGGTTTTCATAGTGGTCCACCACCTTTTGTGATATGAACAGAGAGCATTCAGCTCAGGGCTGAACAAACGTCTGCTCAATAACAACAGCGAGGACGCGGAGATTCGTAAAGACGCAATCGCCATGTTGGGTTACCGATGATGAACGGAAATCAACGAGTGAGGACGAGTGAGGACGACCACATTTTGTTGACAAACAAGTGAAGAAGGAAGGTATCACCAGGGTATCACCGATGAAGGAGCCCCTACTAGCGGCTAACAGTAGCTGTTACACCTGCAAGAGGCACTAGCTGTTCAGGCACAGACTccatccatggatgtattataccGACTCCAACTCTCACGATGTTAGGTTAGGTTACCAGTGTAGTGATGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84159 False 755 lncRNA 0.46 2 19085914 19086862
TU84161 True 1733 lncRNA 0.41 2 19084934 19086862

Neighbor

gene id symbol gene type direction distance location
LOC120560931 coro1c,LOC102291280,LOC106937262,LOC107393983,LOC107091240,LOC102218412 coding upstream 10592 19029407 ~ 19074342 (+)
ssh1a ssh1 coding upstream 62053 19002296 ~ 19022881 (+)
svopa svop coding upstream 91955 18985376 ~ 18992979 (+)
alkbh2 alkbh2 coding upstream 111620 18970284 ~ 18973314 (+)
LOC120560963 NA coding upstream 122126 18961837 ~ 18962808 (+)
sart3 sart3,LOC102781133 coding downstream 935 19087797 ~ 19099604 (+)
cmklr1 NA coding downstream 33283 19120145 ~ 19122475 (+)
limk2 limk2 coding downstream 120917 19207779 ~ 19226925 (+)
tctn2 tctn2 coding downstream 164314 19251176 ~ 19255928 (+)
atp6v0a2b atp6v0a2 coding downstream 169924 19256786 ~ 19269028 (+)
G62796 NA non-coding upstream 102311 18966083 ~ 18982623 (+)
G62755 NA non-coding upstream 220127 18864575 ~ 18864807 (+)
G62741 NA non-coding upstream 311826 18772755 ~ 18773108 (+)
G62732 NA non-coding upstream 336438 18747490 ~ 18748496 (+)
G62667 NA non-coding upstream 447713 18636726 ~ 18637221 (+)
LOC120560789 NA non-coding downstream 64671 19151533 ~ 19153584 (+)
G63005 LOC104920315,LOC103374896,LOC100704901 non-coding downstream 462548 19549410 ~ 19554906 (+)
G63007 NA non-coding downstream 468521 19555383 ~ 19562350 (+)
G63015 LOC107394186,LOC104941583 non-coding downstream 488699 19575561 ~ 19633642 (+)
G63016 NA non-coding downstream 495110 19581972 ~ 19584473 (+)
tmem119a LOC103353570,LOC104946818 other upstream 3280 19076561 ~ 19081654 (+)
mvk mvk,LOC102798305 other upstream 342535 18737518 ~ 18742399 (+)
acacb acacb other upstream 399471 18661157 ~ 18685463 (+)
tpcn1 tpcn1 other upstream 610203 18441347 ~ 18474731 (+)
tbx5b tbx5,LOC103470367 other upstream 665344 18407348 ~ 18419590 (+)
rasl10a rasl10a other downstream 343539 19430401 ~ 19448950 (+)
c6h2orf68 c21h2orf68,c9h2orf68,LOC104941594,LOC103363183,LOC104920309 other downstream 672734 19759596 ~ 19763524 (+)
vps13a vps13a other downstream 1314085 20400947 ~ 20442093 (+)
wdr31 wdr31,LOC102796061 other downstream 1386789 20473651 ~ 20490586 (+)
G63480 rbm19 other downstream 1589555 20676417 ~ 20677916 (+)

Expression


Co-expression Network