ficd (ficd)


Basic Information

Item Value
gene id ficd
gene name ficd
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 19100244 ~ 19102474 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU84214
TTCAAAACCGAGGAAGTCGATGATGTGTATATTTTGTACTTAACTACCGACGCCGACTAATCGTTAACTTTGTCGATGTTTTGGAGTTTTATTTTGGAGTCACATACACGCGACAGGGAGCTAAGTTGAcctcgctaacgttagctaatttaCGAGCTGTTACAGTTAGGTGACTGAGCTGACAGTGTTGGTACTGGGCATGCTGTAATGTTGACCGTGTTTTCGCTGCTTTCAGCCGCCCTTCGGCTCTCCTAGCCGGGGTGGACATACATGGGGAACCGTATCACTAGAAGATGGAGGGTTTAATCGAGGATCGTCATGGCTGCTGTGACGGTGTGTCGTTACACCAGCGGCCGTTTCCTCGGAGGATGGGGCCCGCTGCTGTGTGTCCTCCTCGGCTCTCTGGTGGCCGTCCTGATGCCCCTGGTGGGGGTGGAGGACCAATGCTGCGCCGCCCTGAAGGGCTTCGCTCAGCTCCGCTGCCACCTGTGGGGAAGCTCTCAGCAGCCTCCAGCTGTGCAGTCTACCAGCCTCACTGTCCCCTTTACTGCCCTTGATCTGCTGCCTCTGAGGTCCAAGCCTAGCAAAGAAATGGAGCTGGAGGCCAAGGCGGCGCTGCAGCTGGCTCTGGAGATGAAGAAACTGGGGAAGAGGGAGAAGGCTCACAAGCTGCTGGTGCATGCACTCAGCATGAATCCGGACTATGTGGATGCCCTAACAGAGCTGGGGACCATtctggaggaggagaaagatgtTGTCCAGGCAGACCACCTCTACACTAAGGCCTTGGCCATCTCACCGTGTAATGAGAGAGCTCTGGTCAGCCGGGACCGAACTCTTCCCTTGGTGGAAGAGATTGACCAGCGTTACTTTGG
>XM_039803829.1
ATGACATTCCAGCATGTTCACACGTTCAAAACCGAGGAAGTCGATGATGTGTATATTTTGTACTTAACTACCGACGCCGACTAATCGTTAACTTTGTCGATGTTTTGGAGTTTTATTTTGGAGTCACATACACGCGACAGGGAGCTAAGTTGAcctcgctaacgttagctaatttaCGAGCTGTTACAGTTAGGTGACTGAGCTGACAGTGTTGGTACTGGGCATGCTGTAATGTTGACCGTGTTTTCGCTGCTTTCAGCCGCCCTTCGGCTCTCCTAGCCGGGGTGGACATACATGGGGAACCGTATCACTAGAAGATGGAGGGTTTAATCGAGGATCGTCATGGCTGCTGTGACGGTGTGTCGTTACACCAGCGGCCGTTTCCTCGGAGGATGGGGCCCGCTGCTGTGTGTCCTCCTCGGCTCTCTGGTGGCCGTCCTGATGCCCCTGGTGGGGGTGGAGGACCAATGCTGCGCCGCCCTGAAGGGCTTCGCTCAGCTCCGCTGCCACCTGTGGGGAAGCTCTCAGCAGCCTCCAGCTGTGCAGTCTACCAGCCTCACTGTCCCCTTTACTGCCCTTGATCTGCTGCCTCTGAGGTCCAAGCCTAGCAAAGAAATGGAGCTGGAGGCCAAGGCGGCGCTGCAGCTGGCTCTGGAGATGAAGAAACTGGGGAAGAGGGAGAAGGCTCACAAGCTGCTGGTGCATGCACTCAGCATGAATCCGGACTATGTGGATGCCCTAACAGAGCTGGGGACCATtctggaggaggagaaagatgtTGTCCAGGCAGACCACCTCTACACTAAGGCCTTGGCCATCTCACCGTGTAATGAGAGAGCTCTGGTCAGCCGGGACCGAACTCTTCCCTTGGTGGAAGAGATTGACCAGCGTTACTTTGGCATTGGGCACAAGGTCAAGGCTGCGGCTTATTCCAATACAATAGAAGGCAACTACGCCACTAGGCGAAGACCTACATACCACCACCGTGCTACACAAGGCCAAGGCCGCCAACGCTGCCGCTTGTCTGAGACTTACATCATCCAGACGCTTGCCGCGTTATGCCACCCGCTGAAGAGCCTGCAGGAGCAGAATGAGGCCATCGGAGTGGATGCAGCCATGAAGTACATCAACACCACACTGTTGTCCAGATCAGGAACCATGACTGTCAGTGACATCCTGGAGATTCACCGGCGAGTGCTTGGCTACGTGGACCctgtggagggagggaggctgcgCACCAGCCAGGTGTTTGTGGGCCATCACATCCCCCCACACCCTCGGGACCTGCAGAGACACATGCAGGAGCTGGTTCAGTGGCTCAACTCTGAGGAGGCCCTGCAGATGCACCCTGTGGAGTATGCAGCTCTCGCCCACTACAAACTGGTGTATGTGCACCCATTTGTAGACGGCAATGGCCGCACATCCCGGCTGCTCATGAATCTTGTTCTCATGCAAGCGCGATACCCACCGATCACCATTCGCAAAGAACAAAGGGCTGAGTATTATGCAGCTCTAGACACAGCCAATGAGGGTGATGTGCGGCCCTTCATTCGCTTTATAGCCAAATGTACAGAGATGACATTGGACACATTGTTGATTTCTACCACAGAGCACGCTGTGGGGCTGCCGGGAGCCAGTCAGGACCAAGCCTGTCCCGACTGCAAACAGACCATCCCGATTCACAACTGAGCTGAAGACAGGGAGAGAATCTAAAAGTTCTTATTACGTGTTGAATTGCCTTGTCCTGGCCATACCCCACCGGTATCCCACCCATGCTTCAGTTTGGGTTGTAGACCTGCTGAATTATTTGAAACTGTTGCAGGATGTTGAATTGAAATTGGATTTTGCCATTTAGGTTTGctttttaattaaaagaaacCTTTtcccacttta

Function

symbol description
ficd Predicted to enable protein adenylyltransferase activity. Predicted to act upstream of or within protein adenylylation. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human FICD (FIC domain protein adenylyltransferase).

NR:

description
adenosine monophosphate-protein transferase FICD

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84214 False 875 TUCP 0.55 2 19101241 19102450
XM_039803829.1 True 1893 mRNA 0.53 4 19100244 19102474

Neighbor

gene id symbol gene type direction distance location
iscu iscu,LOC104937683 coding downstream 13588 19084932 ~ 19086656 (-)
LOC120561036 dao coding downstream 99580 18992985 ~ 19000664 (-)
usp30 usp30 coding downstream 115595 18973769 ~ 18984649 (-)
unga ung,LOC102779227 coding downstream 129402 18966794 ~ 18970842 (-)
pxmp2 pxmp2,LOC102778473 coding downstream 134379 18962946 ~ 18965865 (-)
wscd2 wscd2,LOC102782304 coding upstream 20229 19122703 ~ 19139437 (-)
pik3ip1 pik3ip1 coding upstream 125310 19227784 ~ 19234566 (-)
si:ch211-225b11.4 LOC103353536,LOC104950175 coding upstream 135431 19237905 ~ 19250837 (-)
rhbdd3 rhbdd3 coding upstream 255480 19357954 ~ 19362474 (-)
ccdc117 ccdc117 coding upstream 430205 19532679 ~ 19536142 (-)
G62878 NA non-coding downstream 3112 19096786 ~ 19097132 (-)
G62877 sart3 non-coding downstream 4422 19094928 ~ 19095822 (-)
G62876 NA non-coding downstream 5425 19094484 ~ 19094819 (-)
G62875 NA non-coding downstream 7580 19092329 ~ 19092664 (-)
G62874 NA non-coding downstream 9135 19090794 ~ 19091109 (-)
G62916 NA non-coding upstream 92139 19194613 ~ 19195163 (-)
G62942 NA non-coding upstream 165345 19267819 ~ 19269495 (-)
G62947 NA non-coding upstream 176278 19278752 ~ 19278977 (-)
G62948 NA non-coding upstream 181749 19284223 ~ 19284432 (-)
G62949 dnah10 non-coding upstream 183038 19285512 ~ 19285760 (-)
mmab mmab other downstream 362838 18734908 ~ 18737406 (-)
G62626 LOC103357464 other downstream 587983 18510155 ~ 18512261 (-)
zgc:158398 NA other downstream 607837 18488162 ~ 18492407 (-)
iqcd NA other downstream 657226 18437676 ~ 18443018 (-)
G62582 LOC106098714,LOC103357453,LOC102788116 other downstream 713975 18383005 ~ 18386269 (-)
si:ch211-225b11.1 LOC103353539,LOC101465611,LOC100705171 other upstream 77031 19179505 ~ 19237086 (-)
LOC120560442 LOC104920315,LOC103374896,LOC100704901 other upstream 446977 19549451 ~ 19554908 (-)
LOC120561342 NA other upstream 608974 19711448 ~ 19731573 (-)
LOC120561469 NA other upstream 1006942 20109416 ~ 20124872 (-)
G63345 NA other upstream 1166646 20269120 ~ 20282211 (-)

Expression


Co-expression Network